RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
CHMP2A-208ENST00000601220 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
CHMP2A-208ENST00000601220 TRAV5A0A0B4J249 113 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 COX7A2P2O60397 106 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 M6PRP20645 277 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 INPP1P49441 399 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 CLINT1Q14677 625 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 ESRGQ1W209 222 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 C10orf113Q5VZT2 155 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 UPK3BQ9BT76 320 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 DNAJC4Q9NNZ3 241 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 PXMP4Q9Y6I8 212 aa12.46□□□□□ -0.41
CHMP2A-208ENST00000601220 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
CHMP2A-208ENST00000601220 ZNF431Q8TF32 576 aaPredicted RBP12.45□□□□□ -0.42
CHMP2A-208ENST00000601220 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
CHMP2A-208ENST00000601220 A0A0J9YY99 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 H3BNG1 76 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 CCSO14618 274 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 PLA2G10O15496 165 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 GAGE7O76087 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 IL7P13232 177 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 CAMLGP49069 296 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 NRARPQ7Z6K4 114 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 Q9H3A6 140 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
CHMP2A-208ENST00000601220 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 CENPXA8MT69 81 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 RLN2P04090 185 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 DAZ2Q13117 558 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 CNPY1Q3B7I2 92 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
CHMP2A-208ENST00000601220 GUK1Q16774 197 aa12.42□□□□□ -0.42
CHMP2A-208ENST00000601220 Q6ZTI0 123 aa12.42□□□□□ -0.42
CHMP2A-208ENST00000601220 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
CHMP2A-208ENST00000601220 MAPKAPK5-AS1Q8N8E1 139 aa12.42□□□□□ -0.42
CHMP2A-208ENST00000601220 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
CHMP2A-208ENST00000601220 FAM24AA6NFZ4 105 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 SNURFLB1AK76 121 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 J3KRW8 73 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 ZNF253O75346 499 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 CST7O76096 145 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 LEPP41159 167 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 Q6ZRG5 221 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 C11orf72Q8NBR9 251 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 VSIG2Q96IQ7 327 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 PYGO2Q9BRQ0 406 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 C20orf85Q9H1P6 137 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 TMPRSS5Q9H3S3 457 aa12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 MRPS16Q9Y3D3 137 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
CHMP2A-208ENST00000601220 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 L7N2F9 121 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 NDUFB4O95168 129 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 BTF3P20290 206 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 RPL29P47914 159 aaKnown RBP12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 KRTAP10-2P60368 255 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 VAMP2P63027 116 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 IL15RAQ13261 267 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 RAB31Q13636 194 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 OR1L4Q8NGR5 311 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 CHAC2Q8WUX2 184 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 C18orf15Q96N68 181 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 UQCC1Q9NVA1 299 aa12.4□□□□□ -0.42
CHMP2A-208ENST00000601220 KLLNB2CW77 178 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 M0R3E3 92 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 BCAP31P51572 246 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 CAV2P51636 162 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 ERCC8Q13216 396 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 Q8N1X5 172 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 LINC00467Q9BRT7 94 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
CHMP2A-208ENST00000601220 A0A096LPF7 62 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 TCRBP04435 133 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 SLC25A5P05141 298 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 ZNF846Q147U1 533 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 C2orf50Q96LR7 162 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 PFDN5Q99471 154 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 SEC22CQ9BRL7 303 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 AGPAT4-IT1Q9H0P7 198 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 TMEM14CQ9P0S9 112 aa12.38□□□□□ -0.43
CHMP2A-208ENST00000601220 IGSF23A1L1A6 192 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 FAM25EA8MYX2 175 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 LYRM1O43325 122 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 SULT1A1P50225 295 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 CD300CQ08708 224 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 ANXA2RQ3ZCQ2 193 aa12.37□□□□□ -0.43
CHMP2A-208ENST00000601220 LYRM2Q9NU23 88 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms