RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 IGLV1-51P01701 117 aa16.58■□□□□ 0.24
SNRNP70-209ENST00000601065 IGFL4Q6B9Z1 124 aa16.58■□□□□ 0.24
SNRNP70-209ENST00000601065 SMIM7Q9BQ49 75 aa16.58■□□□□ 0.24
SNRNP70-209ENST00000601065 SLC50A1Q9BRV3 221 aa16.58■□□□□ 0.24
SNRNP70-209ENST00000601065 TSPAN4O14817 238 aa16.57■□□□□ 0.24
SNRNP70-209ENST00000601065 CMTM2Q8TAZ6 248 aa16.57■□□□□ 0.24
SNRNP70-209ENST00000601065 TCEAL7Q9BRU2 100 aa16.57■□□□□ 0.24
SNRNP70-209ENST00000601065 TRAV8-2A0A0B4J237 113 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 PEX7O00628 323 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 C2CD4CQ8TF44 421 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 HIST1H2BAQ96A08 127 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 C16orf92Q96LL3 132 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 TRAV25A0A0B4J276 109 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 M0R3E3 92 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 HLA-DMBP28068 263 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 NIPSNAP3BQ9BS92 247 aa16.56■□□□□ 0.24
SNRNP70-209ENST00000601065 IZUMO1RA6ND01 250 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 DNASE2O00115 360 aaPredicted RBP16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 PRB4P10163 310 aaPredicted RBP16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 RPL35P42766 123 aaKnown RBP16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 TFPI2P48307 235 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 INSL3P51460 131 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 PAFAH1B2P68402 229 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 C9orf66Q5T8R8 295 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 WFDC3Q8IUB2 231 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 LINC00479Q96M42 142 aa16.55■□□□□ 0.24
SNRNP70-209ENST00000601065 NOTCH3Q9UM47 2321 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 TCRAP04437 139 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 FAM74A3Q4VXF1 159 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 SAMD13Q5VXD3 122 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 RNF182Q8N6D2 247 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 ATG101Q9BSB4 218 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 MCRIP2Q9BUT9 160 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 K7EQG2 157 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 ISLRO14498 428 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 AKR1C3P42330 323 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 SVBPQ8N300 66 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 OR2K2Q8NGT1 345 aa16.54■□□□□ 0.24
SNRNP70-209ENST00000601065 CMYA5Q8N3K9 4069 aa16.53■□□□□ 0.24
SNRNP70-209ENST00000601065 SPAG8Q99932 426 aaPredicted RBP16.53■□□□□ 0.24
SNRNP70-209ENST00000601065 TRAV2A0A0B4J234 112 aa16.52■□□□□ 0.24
SNRNP70-209ENST00000601065 TRAV34A0A0B4J273 112 aa16.52■□□□□ 0.24
SNRNP70-209ENST00000601065 CNN1P51911 297 aaKnown RBP16.52■□□□□ 0.24
SNRNP70-209ENST00000601065 TMEM241Q24JQ0 296 aa16.52■□□□□ 0.24
SNRNP70-209ENST00000601065 PKD1L1Q8TDX9 2849 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 TRBV20OR9-2A0A075B6H5 130 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 ZNF705FA8MVS1 300 aaPredicted RBP16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 CSN1S1P47710 185 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 GOLT1AQ6ZVE7 132 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 FAM24BQ8N5W8 94 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 CLEC5AQ9NY25 188 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 NAT8Q9UHE5 227 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 DIRC3C9JPN6 131 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 IGLL1P15814 213 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 ID1P41134 155 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 LCN12Q6JVE5 192 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 TVP23CQ96ET8 276 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 C20orf173Q96LM9 149 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 SGK494Q96LW2 274 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 SDF2L1Q9HCN8 221 aa16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 ZNF256Q9Y2P7 627 aaPredicted RBP16.51■□□□□ 0.23
SNRNP70-209ENST00000601065 PRELID1Q9Y255 219 aa16.5■□□□□ 0.23
SNRNP70-209ENST00000601065 PGPEP1LA6NFU8 196 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 M0R036 132 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 PSG3Q16557 428 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 KRTAP21-3Q3LHN1 58 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 OR4C46A6NHA9 309 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 SNAPINO95295 136 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 UBE2G1P62253 170 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 SNRPD3P62318 126 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 CENPWQ5EE01 88 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 ATRAIDQ6UW56 229 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 CLRN3Q8NCR9 226 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 SORL1Q92673 2214 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 MRPL53Q96EL3 112 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 KLF12Q9Y4X4 402 aa16.49■□□□□ 0.23
SNRNP70-209ENST00000601065 TRAV8-1A0A0A6YYK1 113 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 ZNF688P0C7X2 276 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 GNG4P50150 75 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 TAS2R60P59551 318 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 TMEM183BQ1AE95 376 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 PRR31Q5SQ13 230 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 ARL6IP6Q8N6S5 226 aa16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 AURKAIP1Q9NWT8 199 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-209ENST00000601065 C9JCJ5 164 aa16.47■□□□□ 0.23
SNRNP70-209ENST00000601065 K7EQM0 130 aa16.47■□□□□ 0.23
SNRNP70-209ENST00000601065 WIPF1O43516 503 aa16.47■□□□□ 0.23
SNRNP70-209ENST00000601065 IGKV2-40A0A087WW87 121 aaPredicted RBP16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 PRAC2D3DTV9 90 aa16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 IGKV2D-40P01614 121 aaPredicted RBP16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 RPL23P62829 140 aaKnown RBP16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 PNRC1Q12796 327 aaPredicted RBP16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 ADIRFQ15847 76 aa16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 FMC1Q96HJ9 113 aa16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 IGF2BP2-AS1Q96M15 143 aa16.46■□□□□ 0.23
SNRNP70-209ENST00000601065 IGLV2-11P01706 119 aa16.46■□□□□ 0.22
SNRNP70-209ENST00000601065 PSMG4Q5JS54 123 aa16.46■□□□□ 0.22
SNRNP70-209ENST00000601065 LINC01551Q86U37 167 aa16.46■□□□□ 0.22
SNRNP70-209ENST00000601065 ZNF738Q8NE65 137 aa16.46■□□□□ 0.22
SNRNP70-209ENST00000601065 OCC1Q8TAD7 63 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 394 ms