RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SFT2D2O95562 160 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 POLR2GP62487 172 aaKnown RBP eCLIP11.38□□□□□ -0.59
USE1-208ENST00000600970 ID3Q02535 119 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 NPVFQ9HCQ7 196 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 FUT9Q9Y231 359 aa11.38□□□□□ -0.59
USE1-208ENST00000600970 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
USE1-208ENST00000600970 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 J3QL48 77 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 ZNF324O75467 553 aaPredicted RBP11.37□□□□□ -0.59
USE1-208ENST00000600970 SMIM18P0DKX4 95 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 PPP1R1AQ13522 171 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 PXDC1Q5TGL8 231 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 LYPD5Q6UWN5 251 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 Q6ZSN1 163 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 BPIFA4PQ86YQ2 179 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 ZNF680Q8NEM1 530 aa11.37□□□□□ -0.59
USE1-208ENST00000600970 SAT2Q96F10 170 aaPredicted RBP11.37□□□□□ -0.59
USE1-208ENST00000600970 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
USE1-208ENST00000600970 FAUP35544 74 aaKnown RBP11.36□□□□□ -0.59
USE1-208ENST00000600970 MORN5Q5VZ52 161 aa11.36□□□□□ -0.59
USE1-208ENST00000600970 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
USE1-208ENST00000600970 SOSTQ9BQB4 213 aa11.36□□□□□ -0.59
USE1-208ENST00000600970 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
USE1-208ENST00000600970 SRRM2Q9UQ35 2752 aaKnown RBP11.35□□□□□ -0.59
USE1-208ENST00000600970 TRAV9-2A0A087WT02 112 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 SPINK4O60575 86 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 IGLC2P0DOY2 106 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 C4orf46Q504U0 113 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 LINC00467Q9BRT7 94 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 CCDC59Q9P031 241 aaKnown RBP11.35□□□□□ -0.59
USE1-208ENST00000600970 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 LY96Q9Y6Y9 160 aa11.35□□□□□ -0.59
USE1-208ENST00000600970 C7orf71A4D174 169 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 H3BQ15 152 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 GOSR2O14653 212 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 IGHV3-53P01767 116 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
USE1-208ENST00000600970 METTL15P1P0C7V9 234 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 OPCMLQ14982 345 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 TMEM37Q8WXS4 190 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 ST6GAL2Q96JF0 529 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 MSRB1Q9NZV6 116 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 MGAT4CQ9UBM8 478 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
USE1-208ENST00000600970 FABP12A6NFH5 140 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 AGPAT2O15120 278 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 SSSCA1O60232 199 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 CRYBA4P53673 196 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 TCL1AP56279 114 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 ANXA2RQ3ZCQ2 193 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 ZNF546Q86UE3 836 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.6
USE1-208ENST00000600970 OR10P1Q8NGE3 313 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 DYNC2LI1Q8TCX1 351 aa11.33□□□□□ -0.6
USE1-208ENST00000600970 SLC25A21Q9BQT8 299 aaPredicted RBP11.33□□□□□ -0.6
USE1-208ENST00000600970 COX7A2P2O60397 106 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 PRAF2O60831 178 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 CD300CQ08708 224 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
USE1-208ENST00000600970 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
USE1-208ENST00000600970 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 KLLNB2CW77 178 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 K7EP13 123 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 TNFSF8P32971 234 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 ERCC8Q13216 396 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 SLAQ13239 276 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 FHL2Q14192 279 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 C10orf113Q5VZT2 155 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 NEGR1Q7Z3B1 354 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 WFDC10BQ8IUB3 73 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 TOMM5Q8N4H5 51 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 MCFD2Q8NI22 146 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 C8orf49Q96NF6 230 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 MRPL16Q9NX20 251 aaKnown RBP11.31□□□□□ -0.6
USE1-208ENST00000600970 HHLA3Q9XRX5 114 aa11.31□□□□□ -0.6
USE1-208ENST00000600970 AP3S2P59780 193 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 ARL16Q0P5N6 197 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 GUK1Q16774 197 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
USE1-208ENST00000600970 FAM19A4Q96LR4 140 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 MGST2Q99735 147 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 TP53TG3Q9ULZ0 132 aa11.3□□□□□ -0.6
USE1-208ENST00000600970 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
USE1-208ENST00000600970 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
USE1-208ENST00000600970 EVI2AP22794 236 aa11.29□□□□□ -0.6
USE1-208ENST00000600970 VGLL1Q99990 258 aa11.29□□□□□ -0.6
USE1-208ENST00000600970 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 M0R3E3 92 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 TSC22D2O75157 780 aa11.28□□□□□ -0.6
USE1-208ENST00000600970 MPDU1O75352 247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms