RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 IL15RAQ13261 267 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 OR10J6PQ8NGY7 276 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 SAT2Q96F10 170 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 PXMP4Q9Y6I8 212 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 F5H768 121 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 H7BYZ3 331 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 ATP5G1P05496 136 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 ATP5G3P48201 142 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 SULT1A1P50225 295 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 BAXQ07812 192 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 RAB32Q13637 225 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 TMEM252Q8N6L7 170 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 OR1L4Q8NGR5 311 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 PFDN5Q99471 154 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 C20orf144Q9BQM9 153 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 SLC39A9Q9NUM3 307 aa10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-226ENST00000600791 FAM240BA0A1B0GVZ2 78 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 CBY3A6NI87 242 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 S100A11P31949 105 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 RPL29P47914 159 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 GUK1Q16774 197 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 STX12Q86Y82 276 aa10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 NOP10Q9NPE3 64 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-226ENST00000600791 FAM3BP58499 235 aaPredicted RBP10.54□□□□□ -0.72
SHKBP1-226ENST00000600791 HBG1P69891 147 aa10.54□□□□□ -0.72
SHKBP1-226ENST00000600791 HBG2P69892 147 aa10.54□□□□□ -0.72
SHKBP1-226ENST00000600791 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
SHKBP1-226ENST00000600791 ZNF586Q9NXT0 402 aa10.54□□□□□ -0.72
SHKBP1-226ENST00000600791 NPIPB6E9PJ23 425 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 J3KRW8 73 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 ZNF253O75346 499 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 NUDT3O95989 172 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 FGF7P21781 194 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 MZT2BQ6NZ67 158 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 CHAC2Q8WUX2 184 aa10.53□□□□□ -0.72
SHKBP1-226ENST00000600791 ASAH1Q13510 395 aa10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 LINC00299Q6ZSB3 139 aa10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 RNF141Q8WVD5 230 aa10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 ODF3Q96PU9 254 aa10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 GPN1Q9HCN4 374 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-226ENST00000600791 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 M0R3E3 92 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 LEPP41159 167 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 ATP6V1FQ16864 119 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 LINC00612Q8N6U2 182 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 NPCDR1Q9BY65 106 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
SHKBP1-226ENST00000600791 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 MPDU1O75352 247 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 NDUFB4O95168 129 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 PYYP10082 97 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 GCSAMLQ5JQS6 135 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 S100ZQ8WXG8 99 aa10.5□□□□□ -0.73
SHKBP1-226ENST00000600791 SNURFLB1AK76 121 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 SIX6O95475 246 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 CCL18P55774 89 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 NHLH2Q02577 135 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 THAP6Q8TBB0 222 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 ENKURQ8TC29 256 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
SHKBP1-226ENST00000600791 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 NBDYA0A0U1RRE5 68 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 GAGE12BA1L429 117 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 GAGE7O76087 117 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 RLN2P04090 185 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 ERCC8Q13216 396 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 OR5I1Q13606 314 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 PDE6HQ13956 83 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 OR5C1Q8NGR4 320 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 TIMM9Q9Y5J7 89 aa10.48□□□□□ -0.73
SHKBP1-226ENST00000600791 RYR1P21817 5038 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 C7orf71A4D174 169 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 A6NHS1 94 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 UPK1BO75841 260 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 SLC25A5P05141 298 aaKnown RBP10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 M6PRP20645 277 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 HOXA5P20719 270 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 CLINT1Q14677 625 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 LRRC37A5PQ49AS3 106 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 EXOC3-AS1Q8N2X6 119 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
SHKBP1-226ENST00000600791 GNPNAT1Q96EK6 184 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms