RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 BAP18Q8IXM2 172 aa11.31□□□□□ -0.6
RPS28-203ENST00000600659 OR2T35Q8NGX2 323 aa11.31□□□□□ -0.6
RPS28-203ENST00000600659 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
RPS28-203ENST00000600659 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
RPS28-203ENST00000600659 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 PHLDA1Q8WV24 401 aaPredicted RBP11.3□□□□□ -0.6
RPS28-203ENST00000600659 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
RPS28-203ENST00000600659 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 PRM2P04554 102 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 EXOC3-AS1Q8N2X6 119 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
RPS28-203ENST00000600659 FXYD6-FXYD2A0A087WZ82 144 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 SMIM9A6NGZ8 99 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 NPIPB6E9PJ23 425 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 AMBPP02760 352 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 OR10J4P0C629 311 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 RAB2AP61019 212 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 ZNF266Q14584 549 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 OR2G3Q8NGZ4 309 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 RNF141Q8WVD5 230 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 GOLT1BQ9Y3E0 138 aa11.28□□□□□ -0.6
RPS28-203ENST00000600659 SMLR1H3BR10 107 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 INSP01308 110 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 CT45A10P0DMU9 189 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 M6PRP20645 277 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 RHOBP62745 196 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 C12orf74Q32Q52 190 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 Q6ZTC4 211 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.61
RPS28-203ENST00000600659 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 CDKN1BP46527 198 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 RPL7L1Q6DKI1 246 aaKnown RBP11.26□□□□□ -0.61
RPS28-203ENST00000600659 ZNF767PQ75MW2 155 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
RPS28-203ENST00000600659 OR10J6PQ8NGY7 276 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 FAM19A4Q96LR4 140 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 PSMG3Q9BT73 122 aaPredicted RBP11.26□□□□□ -0.61
RPS28-203ENST00000600659 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
RPS28-203ENST00000600659 OR7C2O60412 319 aa11.25□□□□□ -0.61
RPS28-203ENST00000600659 ICAM4Q14773 271 aa11.25□□□□□ -0.61
RPS28-203ENST00000600659 ACOT6Q3I5F7 207 aaPredicted RBP11.25□□□□□ -0.61
RPS28-203ENST00000600659 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
RPS28-203ENST00000600659 PRELID1Q9Y255 219 aa11.25□□□□□ -0.61
RPS28-203ENST00000600659 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 ZNF705GA8MUZ8 300 aaPredicted RBP11.24□□□□□ -0.61
RPS28-203ENST00000600659 HBE1P02100 147 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 AZU1P20160 251 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 UBE2L3P68036 154 aaKnown RBP11.24□□□□□ -0.61
RPS28-203ENST00000600659 ERCC8Q13216 396 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 INO80EQ8NBZ0 244 aaPredicted RBP11.24□□□□□ -0.61
RPS28-203ENST00000600659 OR11H4Q8NGC9 324 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 CYTL1Q9NRR1 136 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 DNAH6Q9C0G6 4158 aa11.24□□□□□ -0.61
RPS28-203ENST00000600659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
RPS28-203ENST00000600659 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
RPS28-203ENST00000600659 EMP1P54849 157 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 FAM122CQ6P4D5 195 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 LINC00476Q8WZB0 136 aa11.23□□□□□ -0.61
RPS28-203ENST00000600659 KLK5Q9Y337 293 aaPredicted RBP11.23□□□□□ -0.61
RPS28-203ENST00000600659 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
RPS28-203ENST00000600659 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
RPS28-203ENST00000600659 ARPC5O15511 151 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 TSPOP30536 169 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 TAS2R45P59539 299 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 SSX7Q7RTT5 188 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 VGLL1Q99990 258 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 Q9H3A6 140 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 PLA2G2EQ9NZK7 142 aa11.22□□□□□ -0.61
RPS28-203ENST00000600659 KLLNB2CW77 178 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 C11orf94C9JXX5 98 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 JTBO76095 146 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 RANP62826 216 aaKnown RBP11.21□□□□□ -0.61
RPS28-203ENST00000600659 SERF2P84101 59 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 PRR9Q5T870 116 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 PQLC2Q6ZP29 291 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 LYPD1Q8N2G4 141 aa11.21□□□□□ -0.61
RPS28-203ENST00000600659 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms