RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 CDX1P47902 265 aaPredicted RBP15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BDP58876 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BCP62807 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 RPL19P84098 196 aaKnown RBP15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST2H2BEQ16778 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 ACTL10Q5JWF8 245 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.35■□□□□ 0.05
PNKP-214ENST00000600573 FRZBQ92765 325 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BHQ93079 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BNQ99877 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 HIST1H2BMQ99879 126 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 MLST8Q9BVC4 326 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 DAZ1Q9NQZ3 744 aaKnown RBP15.35■□□□□ 0.05
PNKP-214ENST00000600573 ZNF492Q9P255 531 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 SMAD5-AS1Q9Y6J3 95 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 DIRC3C9JPN6 131 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 C10orf99Q6UWK7 81 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 SGK494Q96LW2 274 aa15.35■□□□□ 0.05
PNKP-214ENST00000600573 TRGC1P0CF51 173 aa15.34■□□□□ 0.05
PNKP-214ENST00000600573 PRR27Q6MZM9 219 aa15.34■□□□□ 0.05
PNKP-214ENST00000600573 UNQ9165/PRO28630Q6UXU0 137 aa15.34■□□□□ 0.05
PNKP-214ENST00000600573 TMEM183AQ8IXX5 376 aa15.34■□□□□ 0.05
PNKP-214ENST00000600573 MXRA5Q9NR99 2828 aa15.34■□□□□ 0.05
PNKP-214ENST00000600573 IGLV2-11P01706 119 aa15.33■□□□□ 0.04
PNKP-214ENST00000600573 PRNTQ86SH4 94 aa15.33■□□□□ 0.04
PNKP-214ENST00000600573 SMR3AQ99954 134 aa15.33■□□□□ 0.04
PNKP-214ENST00000600573 ZNF331Q9NQX6 463 aaPredicted RBP15.33■□□□□ 0.04
PNKP-214ENST00000600573 OTOGQ6ZRI0 2925 aa15.33■□□□□ 0.04
PNKP-214ENST00000600573 TRAV8-1A0A0A6YYK1 113 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 IGHV7-4-1A0A0J9YVY3 117 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 SMIM27A0A1W2PRY6 76 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 LGALS9O00182 355 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 FABP9Q0Z7S8 132 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 PSG3Q16557 428 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 REC114Q7Z4M0 266 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 NUDT10Q8NFP7 164 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 GLMPQ8WWB7 406 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 NUDT11Q96G61 164 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 ZFP30Q9Y2G7 519 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 MYO9AB2RTY4 2548 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 M0R3E3 92 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 APOHP02749 345 aaPredicted RBP15.32■□□□□ 0.04
PNKP-214ENST00000600573 NDUFA6P56556 154 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 MRPL53Q96EL3 112 aaKnown RBP15.32■□□□□ 0.04
PNKP-214ENST00000600573 PSG8Q9UQ74 426 aa15.32■□□□□ 0.04
PNKP-214ENST00000600573 ZNF207O43670 478 aaKnown RBP15.31■□□□□ 0.04
PNKP-214ENST00000600573 NDUFA7O95182 113 aa15.31■□□□□ 0.04
PNKP-214ENST00000600573 SAMD13Q5VXD3 122 aa15.31■□□□□ 0.04
PNKP-214ENST00000600573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.31■□□□□ 0.04
PNKP-214ENST00000600573 SMPXQ9UHP9 88 aa15.31■□□□□ 0.04
PNKP-214ENST00000600573 AKR1D1P51857 326 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 COX19Q49B96 90 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 CT83Q5H943 113 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 GBGT1Q8N5D6 347 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 C4orf3Q8WVX3 66 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 RPP21Q9H633 154 aaKnown RBP15.3■□□□□ 0.04
PNKP-214ENST00000600573 TRAPPC1Q9Y5R8 145 aa15.3■□□□□ 0.04
PNKP-214ENST00000600573 C19orf71A6NCJ1 209 aa15.29■□□□□ 0.04
PNKP-214ENST00000600573 TCL1AP56279 114 aa15.29■□□□□ 0.04
PNKP-214ENST00000600573 WIPF2Q8TF74 440 aaPredicted RBP15.29■□□□□ 0.04
PNKP-214ENST00000600573 DAZAP1Q96EP5 407 aaKnown RBP15.29■□□□□ 0.04
PNKP-214ENST00000600573 IGHV3-66A0A0C4DH42 116 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 IZUMO1RA6ND01 250 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 A8MWP6 167 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 P01737 135 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 RHPN1-AS1Q9BWJ2 59 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 CHEK1O14757 476 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 HOXA5P20719 270 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 OR4B1Q8NGF8 309 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 TSKUQ8WUA8 353 aa15.28■□□□□ 0.04
PNKP-214ENST00000600573 ANK3Q12955 4377 aaKnown RBP15.27■□□□□ 0.04
PNKP-214ENST00000600573 IGHV3-49A0A0A0MS15 119 aa15.27■□□□□ 0.03
PNKP-214ENST00000600573 RBAKDNA6NC62 111 aa15.27■□□□□ 0.03
PNKP-214ENST00000600573 CA1P00915 261 aaPredicted RBP15.27■□□□□ 0.03
PNKP-214ENST00000600573 WDR73Q6P4I2 378 aa15.27■□□□□ 0.03
PNKP-214ENST00000600573 IGHV3OR16-13A0A075B7E8 117 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 IGHV3-74A0A0B4J1X5 117 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 MT-ND6P03923 174 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 TM4SF20Q53R12 229 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 LCN12Q6JVE5 192 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 C8orf86Q6ZUL3 223 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 NAT8BQ9UHF3 227 aa15.26■□□□□ 0.03
PNKP-214ENST00000600573 TLN2Q9Y4G6 2542 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 IGHV4OR15-8A0A075B7B6 117 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 A0A087WW49 117 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 IGKV2-40A0A087WW87 121 aaPredicted RBP15.25■□□□□ 0.03
PNKP-214ENST00000600573 A8MWL6 223 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 NPIPB6E9PJ23 425 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 LINC01619G3V211 115 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 IGKV2D-40P01614 121 aaPredicted RBP15.25■□□□□ 0.03
PNKP-214ENST00000600573 KLF5Q13887 457 aaPredicted RBP15.25■□□□□ 0.03
PNKP-214ENST00000600573 SMUG1Q53HV7 270 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 SAPCD1Q5SSQ6 148 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 LINC00322Q6ZN03 302 aaPredicted RBP15.25■□□□□ 0.03
PNKP-214ENST00000600573 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 DPF1Q92782 380 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 ZC2HC1AQ96GY0 325 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 GNB1LQ9BYB4 327 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 TCF21O43680 179 aa15.25■□□□□ 0.03
PNKP-214ENST00000600573 S100A8P05109 93 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms