RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 CD300CQ08708 224 aa10.66□□□□□ -0.7
LTBP4-228ENST00000600499 FAM122CQ6P4D5 195 aa10.66□□□□□ -0.7
LTBP4-228ENST00000600499 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
LTBP4-228ENST00000600499 C1QTNF4Q9BXJ3 329 aa10.66□□□□□ -0.7
LTBP4-228ENST00000600499 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
LTBP4-228ENST00000600499 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
LTBP4-228ENST00000600499 OR10J4P0C629 311 aa10.65□□□□□ -0.7
LTBP4-228ENST00000600499 CNN1P51911 297 aaKnown RBP10.65□□□□□ -0.7
LTBP4-228ENST00000600499 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
LTBP4-228ENST00000600499 BAP18Q8IXM2 172 aa10.65□□□□□ -0.7
LTBP4-228ENST00000600499 ZNF471Q9BX82 626 aaPredicted RBP10.65□□□□□ -0.7
LTBP4-228ENST00000600499 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
LTBP4-228ENST00000600499 RETNQ9HD89 108 aa10.65□□□□□ -0.7
LTBP4-228ENST00000600499 CTXND1A0A1B0GTU2 59 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF705FA8MVS1 300 aaPredicted RBP10.64□□□□□ -0.71
LTBP4-228ENST00000600499 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 UBE2L3P68036 154 aaKnown RBP10.64□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF726P1Q15940 193 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 BLNKQ8WV28 456 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 PHYHIPLQ96FC7 376 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 AAMDCQ9H7C9 122 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF705EA8MWA4 302 aaPredicted RBP10.63□□□□□ -0.71
LTBP4-228ENST00000600499 UMAD1C9J7I0 102 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 ARL14EPLP0DKL9 152 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 AKR1C8PQ5T2L2 129 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 SSX7Q7RTT5 188 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 EXOC3-AS1Q8N2X6 119 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 C9orf62Q8N4C0 152 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
LTBP4-228ENST00000600499 NPIPB6E9PJ23 425 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 M0R3E3 92 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 PFDN1O60925 122 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
LTBP4-228ENST00000600499 CXorf1O96002 111 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 AMBPP02760 352 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF705DP0CH99 300 aaPredicted RBP10.62□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF705BP0CI00 300 aaPredicted RBP10.62□□□□□ -0.71
LTBP4-228ENST00000600499 TPT1P13693 172 aaKnown RBP10.62□□□□□ -0.71
LTBP4-228ENST00000600499 GCHFRP30047 84 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 ICAM4Q14773 271 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 ODF3Q96PU9 254 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
LTBP4-228ENST00000600499 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
LTBP4-228ENST00000600499 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
LTBP4-228ENST00000600499 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
LTBP4-228ENST00000600499 ZFP69Q49AA0 526 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 DPPA3Q6W0C5 159 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
LTBP4-228ENST00000600499 C9orf47Q6ZRZ4 202 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 SLC51BQ86UW2 128 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 NEU1Q99519 415 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 RARRES2Q99969 163 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 Q9H3A6 140 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 XCL2Q9UBD3 114 aa10.61□□□□□ -0.71
LTBP4-228ENST00000600499 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
LTBP4-228ENST00000600499 IGKV3-20P01619 116 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
LTBP4-228ENST00000600499 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 RXFP4Q8TDU9 374 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 MBD3L1Q8WWY6 194 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 LINC00477Q96M19 166 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 X6R8D5 127 aa10.6□□□□□ -0.71
LTBP4-228ENST00000600499 BOLA2-SMG1P6H3BVE0 249 aa10.59□□□□□ -0.71
LTBP4-228ENST00000600499 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
LTBP4-228ENST00000600499 C11orf68Q9H3H3 251 aaKnown RBP10.59□□□□□ -0.71
LTBP4-228ENST00000600499 TRBV7-9A0A0J9YWB2 115 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 A0A1W2PRE2 83 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 MIFP14174 115 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 RAB5CP51148 216 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 EIF5AL1Q6IS14 154 aaKnown RBP10.58□□□□□ -0.72
LTBP4-228ENST00000600499 C1orf158Q8N1D5 194 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 Q8NAQ8 132 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 TMED6Q8WW62 240 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
LTBP4-228ENST00000600499 MAP1LC3B2A6NCE7 125 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 PGPA6NDG6 321 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 SMIM9A6NGZ8 99 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 DIRC3C9JPN6 131 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 NMBP08949 121 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 CRISP2P16562 243 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 CDKN1BP46527 198 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 CSN1S1P47710 185 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 FHITP49789 147 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 FXYD7P58549 80 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 MAP1LC3BQ9GZQ8 125 aa10.57□□□□□ -0.72
LTBP4-228ENST00000600499 M0R2Z0 102 aa10.56□□□□□ -0.72
LTBP4-228ENST00000600499 TSPOP30536 169 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms