RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 KCNIP2Q9NS61 270 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 TRAV5A0A0B4J249 113 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 H3BQ15 152 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 H7BYZ3 331 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 PET100P0DJ07 73 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 MORN5Q5VZ52 161 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 POM121L12Q8N7R1 296 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
IRF3-226ENST00000600453 C17orf112F2Z3M2 114 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 SSNA1O43805 119 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
IRF3-226ENST00000600453 HIST1H1EP10412 219 aaKnown RBP11.13□□□□□ -0.63
IRF3-226ENST00000600453 PDE6HQ13956 83 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 LRRC37A5PQ49AS3 106 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
IRF3-226ENST00000600453 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 TIMM9Q9Y5J7 89 aa11.13□□□□□ -0.63
IRF3-226ENST00000600453 hCG_2014768A0A024R1R8 64 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 H3BTX0 84 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 SLC17A3O00476 420 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 HTN1P15515 57 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 HTN3P15516 51 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 LEPP41159 167 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 ODF3Q96PU9 254 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 AAMDCQ9H7C9 122 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
IRF3-226ENST00000600453 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
IRF3-226ENST00000600453 PPP1R1CQ8WVI7 109 aa11.11□□□□□ -0.63
IRF3-226ENST00000600453 OR5AC2Q9NZP5 309 aa11.11□□□□□ -0.63
IRF3-226ENST00000600453 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
IRF3-226ENST00000600453 CBY3A6NI87 242 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 AZU1P20160 251 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 CLINT1Q14677 625 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 RNF212Q495C1 297 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 C15orf53Q8NAA6 179 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 THAP6Q8TBB0 222 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 TMEM263Q8WUH6 116 aaKnown RBP11.1□□□□□ -0.63
IRF3-226ENST00000600453 ASB13Q8WXK3 278 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 MRPL32Q9BYC8 188 aaKnown RBP11.1□□□□□ -0.63
IRF3-226ENST00000600453 WDR61Q9GZS3 305 aaKnown RBP11.1□□□□□ -0.63
IRF3-226ENST00000600453 KMT2AQ03164 3969 aa11.1□□□□□ -0.63
IRF3-226ENST00000600453 PRAC2D3DTV9 90 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 H0YIZ8 118 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 MPC2O95563 127 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 PRM2P04554 102 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 ATP5G1P05496 136 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 DEFB130BP0DP73 79 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 DEFB130AP0DP74 79 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 ATP5G3P48201 142 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 H2BFSP57053 126 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 AKAP14Q86UN6 197 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 ALG5Q9Y673 324 aa11.09□□□□□ -0.63
IRF3-226ENST00000600453 IFNA5P01569 189 aa11.08□□□□□ -0.64
IRF3-226ENST00000600453 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
IRF3-226ENST00000600453 NBEAP1P0C6P0 100 aa11.08□□□□□ -0.64
IRF3-226ENST00000600453 ATP5SQ99766 215 aa11.08□□□□□ -0.64
IRF3-226ENST00000600453 MED28Q9H204 178 aa11.08□□□□□ -0.64
IRF3-226ENST00000600453 OR51M1Q9H341 326 aa11.08□□□□□ -0.64
IRF3-226ENST00000600453 EPPK1P58107 5090 aaKnown RBP11.07□□□□□ -0.64
IRF3-226ENST00000600453 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 CT45A10P0DMU9 189 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 RPL12P30050 165 aaKnown RBP11.07□□□□□ -0.64
IRF3-226ENST00000600453 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 TMEM88Q6PEY1 159 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 BLNKQ8WV28 456 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 HSPB11Q9Y547 144 aa11.07□□□□□ -0.64
IRF3-226ENST00000600453 F5H768 121 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 NDUFB4O95168 129 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 PYYP10082 97 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 PRB4P10163 310 aaPredicted RBP11.06□□□□□ -0.64
IRF3-226ENST00000600453 FAM3BP58499 235 aaPredicted RBP11.06□□□□□ -0.64
IRF3-226ENST00000600453 GCSAMLQ5JQS6 135 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
IRF3-226ENST00000600453 PAXXQ9BUH6 204 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
IRF3-226ENST00000600453 FUT9Q9Y231 359 aa11.06□□□□□ -0.64
IRF3-226ENST00000600453 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 SNURFLB1AK76 121 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 M0R3E3 92 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 NMBP08949 121 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 TAS2R45P59539 299 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 FCN2Q15485 313 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 C9orf47Q6ZRZ4 202 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 MIR17HGQ75NE6 70 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 RNF141Q8WVD5 230 aa11.05□□□□□ -0.64
IRF3-226ENST00000600453 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms