RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 MLST8Q9BVC4 326 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 CHEK1O14757 476 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 LY6G6DO95868 133 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 TCL1AP56279 114 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 HIST2H2BDQ6DRA6 164 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 TMEM75Q8N9X5 138 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 UBE2E2Q96LR5 201 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 PYGO2Q9BRQ0 406 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
HIF3A-218ENST00000600383 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
HIF3A-218ENST00000600383 A0A087X0K7 114 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 A0A1W2PS18 150 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 SPINK4O60575 86 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 ZNF253O75346 499 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 SRD5A1P18405 259 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 EDN2P20800 178 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 KHDC1LQ5JSQ8 128 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-218ENST00000600383 C8orf86Q6ZUL3 223 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 GLMPQ8WWB7 406 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 OTOGQ6ZRI0 2925 aa11.58□□□□□ -0.56
HIF3A-218ENST00000600383 GATCO43716 136 aaKnown RBP11.57□□□□□ -0.56
HIF3A-218ENST00000600383 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 SMIM12Q96EX1 92 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 LGALS1P09382 135 aaKnown RBP11.57□□□□□ -0.56
HIF3A-218ENST00000600383 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 DAZAP1Q96EP5 407 aaKnown RBP11.57□□□□□ -0.56
HIF3A-218ENST00000600383 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 SLC50A1Q9BRV3 221 aa11.57□□□□□ -0.56
HIF3A-218ENST00000600383 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
HIF3A-218ENST00000600383 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 A0A087WW49 117 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 S100A6P06703 90 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 SCGB2A2Q13296 93 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 VGLL1Q99990 258 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 SRD5A3Q9H8P0 318 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 PRAC2D3DTV9 90 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 SYNJ2BPP57105 145 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
HIF3A-218ENST00000600383 TRAV8-2A0A0B4J237 113 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 P01737 135 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 RNF152Q8N8N0 203 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 Q8TAT8 98 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 ZNF418Q8TF45 676 aaPredicted RBP11.55□□□□□ -0.56
HIF3A-218ENST00000600383 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 SMPXQ9UHP9 88 aa11.55□□□□□ -0.56
HIF3A-218ENST00000600383 SNRPEP62304 92 aaKnown RBP11.54□□□□□ -0.56
HIF3A-218ENST00000600383 ERCC8Q13216 396 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 TCTEX1D4Q5JR98 221 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 LURAP1LQ8IV03 231 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 FRZBQ92765 325 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 UFC1Q9Y3C8 167 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 K7EMT4 169 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-218ENST00000600383 GBGT1Q8N5D6 347 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 BTF3L4Q96K17 158 aa11.54□□□□□ -0.56
HIF3A-218ENST00000600383 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
HIF3A-218ENST00000600383 FLNBO75369 2602 aaKnown RBP11.53□□□□□ -0.56
HIF3A-218ENST00000600383 TRBV6-1A0A0K0K1D8 114 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 FABP9Q0Z7S8 132 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HAX1O00165 279 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 TYMSP04818 313 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 S100A8P05109 93 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-218ENST00000600383 ARL6IP6Q8N6S5 226 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 DUX3Q96PT4 197 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
HIF3A-218ENST00000600383 C19orf71A6NCJ1 209 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 PRR25Q96S07 402 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 RPP21Q9H633 154 aaKnown RBP11.52□□□□□ -0.57
HIF3A-218ENST00000600383 NRN1Q9NPD7 142 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
HIF3A-218ENST00000600383 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms