RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 UBE2CO00762 179 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 NDUFB4O95168 129 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 HBE1P02100 147 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 PPT1P50897 306 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 ZNF726P1Q15940 193 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
USHBP1-210ENST00000600286 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 Q9H3A6 140 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
USHBP1-210ENST00000600286 A0A0J9YX75 114 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
USHBP1-210ENST00000600286 PGPA6NDG6 321 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
USHBP1-210ENST00000600286 H3BMM0 161 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
USHBP1-210ENST00000600286 HLA-DMBP28068 263 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 FHITP49789 147 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-210ENST00000600286 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 OR8A1Q8NGG7 326 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 NKX6-2Q9C056 277 aaPredicted RBP12.34□□□□□ -0.43
USHBP1-210ENST00000600286 CSTL1Q9H114 145 aa12.34□□□□□ -0.43
USHBP1-210ENST00000600286 ZNF705FA8MVS1 300 aaPredicted RBP12.33□□□□□ -0.44
USHBP1-210ENST00000600286 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
USHBP1-210ENST00000600286 BLOC1S1P78537 153 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 HIST1H1AQ02539 215 aaPredicted RBP12.33□□□□□ -0.44
USHBP1-210ENST00000600286 ALKAL2Q6UX46 152 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 SUN5Q8TC36 379 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
USHBP1-210ENST00000600286 A0A1W2PRE2 83 aa12.32□□□□□ -0.44
USHBP1-210ENST00000600286 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
USHBP1-210ENST00000600286 NHLRC4P0CG21 123 aaPredicted RBP12.32□□□□□ -0.44
USHBP1-210ENST00000600286 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
USHBP1-210ENST00000600286 ARL6IP6Q8N6S5 226 aa12.32□□□□□ -0.44
USHBP1-210ENST00000600286 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
USHBP1-210ENST00000600286 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
USHBP1-210ENST00000600286 F6UB75 175 aa12.31□□□□□ -0.44
USHBP1-210ENST00000600286 K7EQM0 130 aa12.31□□□□□ -0.44
USHBP1-210ENST00000600286 HAGHQ16775 308 aa12.31□□□□□ -0.44
USHBP1-210ENST00000600286 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
USHBP1-210ENST00000600286 ASCL2Q99929 193 aa12.31□□□□□ -0.44
USHBP1-210ENST00000600286 TMPRSS5Q9H3S3 457 aa12.31□□□□□ -0.44
USHBP1-210ENST00000600286 A0A1B0GV50 99 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 M0R3E3 92 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 CA1P00915 261 aaPredicted RBP12.3□□□□□ -0.44
USHBP1-210ENST00000600286 IFNA7P01567 189 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 SLC25A5P05141 298 aaKnown RBP12.3□□□□□ -0.44
USHBP1-210ENST00000600286 CNN1P51911 297 aaKnown RBP12.3□□□□□ -0.44
USHBP1-210ENST00000600286 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
USHBP1-210ENST00000600286 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 GDF5OSQ5U4N7 250 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
USHBP1-210ENST00000600286 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 SERTM2A0A1B0GWG4 89 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 F6UZH7 168 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 IFNA1P01562 189 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 AMBPP02760 352 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 TSPOP30536 169 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 DEFB1P60022 68 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 UBE2G2P60604 165 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 C5orf17Q8NAS9 161 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 SPATA25Q9BR10 227 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 RPH3ALQ9UNE2 315 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
USHBP1-210ENST00000600286 RBAKDNA6NC62 111 aa12.28□□□□□ -0.44
USHBP1-210ENST00000600286 ZNF705DP0CH99 300 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-210ENST00000600286 ZNF705BP0CI00 300 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-210ENST00000600286 Q6ZWC4 215 aa12.28□□□□□ -0.44
USHBP1-210ENST00000600286 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
USHBP1-210ENST00000600286 TEX261Q6UWH6 196 aa12.27□□□□□ -0.45
USHBP1-210ENST00000600286 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
USHBP1-210ENST00000600286 MANBALQ9NQG1 85 aa12.27□□□□□ -0.45
USHBP1-210ENST00000600286 KMT2CQ8NEZ4 4911 aaKnown RBP12.26□□□□□ -0.45
USHBP1-210ENST00000600286 FAM74A7A6NL05 159 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 DIRC3C9JPN6 131 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 NPIPB6E9PJ23 425 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 LEPP41159 167 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 GNG13Q9P2W3 67 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 EPDR1Q9UM22 224 aa12.26□□□□□ -0.45
USHBP1-210ENST00000600286 FBLL1A6NHQ2 334 aaKnown RBP12.25□□□□□ -0.45
USHBP1-210ENST00000600286 A8MTW9 85 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 PAGE4O60829 102 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
USHBP1-210ENST00000600286 C9orf47Q6ZRZ4 202 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 GOLT1AQ6ZVE7 132 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 TXNDC17Q9BRA2 123 aa12.25□□□□□ -0.45
USHBP1-210ENST00000600286 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms