RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 MORN5Q5VZ52 161 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 RPL7L1Q6DKI1 246 aaKnown RBP13.6□□□□□ -0.23
FARP1-229ENST00000600190 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 PAXXQ9BUH6 204 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 SAV1Q9H4B6 383 aaPredicted RBP13.6□□□□□ -0.23
FARP1-229ENST00000600190 AAMDCQ9H7C9 122 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 PPP1R14DQ9NXH3 145 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 DNAH17Q9UFH2 4485 aa13.6□□□□□ -0.23
FARP1-229ENST00000600190 G3V3Q6 166 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 MRPS12O15235 138 aaKnown RBP13.59□□□□□ -0.23
FARP1-229ENST00000600190 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
FARP1-229ENST00000600190 PSG3Q16557 428 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 ZNF767PQ75MW2 155 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 MIR17HGQ75NE6 70 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 TCTE3Q8IZS6 198 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 KCNRGQ8N5I3 272 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 CSNK1G2-AS1Q8NCQ2 148 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 OR2G3Q8NGZ4 309 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 PKHD1P08F94 4074 aa13.59□□□□□ -0.23
FARP1-229ENST00000600190 SNRPCP09234 159 aaKnown RBP13.58□□□□□ -0.24
FARP1-229ENST00000600190 HLA-DRB4P13762 266 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 PDE6HQ13956 83 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 FAM122CQ6P4D5 195 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 BLNKQ8WV28 456 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 ST6GAL2Q96JF0 529 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 ZNF331Q9NQX6 463 aaPredicted RBP13.58□□□□□ -0.24
FARP1-229ENST00000600190 CELA1Q9UNI1 258 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 HLA-DRB4X5D2U9 266 aa13.58□□□□□ -0.24
FARP1-229ENST00000600190 DEFB131BA0A096LNP1 70 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 H3BMM0 161 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 ZNF253O75346 499 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 NBEAP1P0C6P0 100 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 IGLC2P0DOY2 106 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 AKR1C8PQ5T2L2 129 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 LINC00336Q6ZUF6 198 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 HYLS1Q96M11 299 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 C17orf77Q96MU5 243 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 SLC25A2Q9BXI2 301 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
FARP1-229ENST00000600190 PYYP10082 97 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 CDC34P49427 236 aaPredicted RBP13.56□□□□□ -0.24
FARP1-229ENST00000600190 C12orf74Q32Q52 190 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 PQLC2Q6ZP29 291 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 OR11H4Q8NGC9 324 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 ZNF471Q9BX82 626 aaPredicted RBP13.56□□□□□ -0.24
FARP1-229ENST00000600190 ACTR3CQ9C0K3 210 aaPredicted RBP13.56□□□□□ -0.24
FARP1-229ENST00000600190 ZNF586Q9NXT0 402 aa13.56□□□□□ -0.24
FARP1-229ENST00000600190 TRBV19A0A075B6N1 114 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 A0A0J9YX75 114 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 H3BQ15 152 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 H3BTX0 84 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 IGKV3-20P01619 116 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 C1QBP02746 253 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 RAB2AP61019 212 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
FARP1-229ENST00000600190 XCL2Q9UBD3 114 aa13.55□□□□□ -0.24
FARP1-229ENST00000600190 TRAV8-2A0A0B4J237 113 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 OR10J4P0C629 311 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 UBE2L3P68036 154 aaKnown RBP13.54□□□□□ -0.24
FARP1-229ENST00000600190 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 TMUB2Q71RG4 321 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 SAT2Q96F10 170 aaPredicted RBP13.54□□□□□ -0.24
FARP1-229ENST00000600190 C20orf173Q96LM9 149 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 RYR1P21817 5038 aa13.54□□□□□ -0.24
FARP1-229ENST00000600190 PKD1P98161 4303 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 BCL2L11O43521 198 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 AMBPP02760 352 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 P0DMU3 169 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 FAM231AP0DMU4 169 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 FAM231CP0DMU5 169 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 CSN1S1P47710 185 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 LYPD1Q8N2G4 141 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 POM121L12Q8N7R1 296 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 FAM167A-AS1Q96KT0 104 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 SH3BGRL3Q9H299 93 aa13.53□□□□□ -0.24
FARP1-229ENST00000600190 F6UB75 175 aa13.52□□□□□ -0.25
FARP1-229ENST00000600190 M0R2N4 97 aa13.52□□□□□ -0.25
FARP1-229ENST00000600190 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
FARP1-229ENST00000600190 GDF5OSQ5U4N7 250 aa13.52□□□□□ -0.25
FARP1-229ENST00000600190 EIF5AL1Q6IS14 154 aaKnown RBP13.52□□□□□ -0.25
FARP1-229ENST00000600190 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.25
FARP1-229ENST00000600190 CYTL1Q9NRR1 136 aa13.52□□□□□ -0.25
FARP1-229ENST00000600190 SLC17A3O00476 420 aa13.51□□□□□ -0.25
FARP1-229ENST00000600190 TPT1P13693 172 aaKnown RBP13.51□□□□□ -0.25
FARP1-229ENST00000600190 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
FARP1-229ENST00000600190 MRPL53Q96EL3 112 aaKnown RBP13.51□□□□□ -0.25
FARP1-229ENST00000600190 CXorf1O96002 111 aa13.5□□□□□ -0.25
FARP1-229ENST00000600190 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
FARP1-229ENST00000600190 CNN1P51911 297 aaKnown RBP13.5□□□□□ -0.25
FARP1-229ENST00000600190 EMP1P54849 157 aa13.5□□□□□ -0.25
FARP1-229ENST00000600190 DEFB1P60022 68 aa13.5□□□□□ -0.25
FARP1-229ENST00000600190 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms