RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 HSD17B11Q8NBQ5 300 aa13.39□□□□□ -0.27
PNKP-213ENST00000599543 H3BQ15 152 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 SLC17A3O00476 420 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 ARPC5O15511 151 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 HBE1P02100 147 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 PYYP10082 97 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 BPIFA4PQ86YQ2 179 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 POM121L12Q8N7R1 296 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 LRRC20Q8TCA0 184 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 DKK2Q9UBU2 259 aa13.38□□□□□ -0.27
PNKP-213ENST00000599543 OR11H4Q8NGC9 324 aa13.37□□□□□ -0.27
PNKP-213ENST00000599543 NIPSNAP3BQ9BS92 247 aa13.37□□□□□ -0.27
PNKP-213ENST00000599543 SLC25A2Q9BXI2 301 aa13.37□□□□□ -0.27
PNKP-213ENST00000599543 A0A087X0K7 114 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 LOC102723971A0A1B0GUV8 181 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 RPL7L1Q6DKI1 246 aaKnown RBP13.36□□□□□ -0.27
PNKP-213ENST00000599543 LINC00336Q6ZUF6 198 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 C1orf158Q8N1D5 194 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 TMEM208Q9BTX3 173 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 SH3BGRL3Q9H299 93 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
PNKP-213ENST00000599543 IGLC2P0DOY2 106 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 RAB2AP61019 212 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 ZNF738Q8NE65 137 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 FAM210BQ96KR6 192 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 PARD6GQ9BYG4 376 aaPredicted RBP13.35□□□□□ -0.27
PNKP-213ENST00000599543 ZNF586Q9NXT0 402 aa13.35□□□□□ -0.27
PNKP-213ENST00000599543 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
PNKP-213ENST00000599543 ATP6V0CP27449 155 aa13.34□□□□□ -0.27
PNKP-213ENST00000599543 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
PNKP-213ENST00000599543 FAM167A-AS1Q96KT0 104 aa13.34□□□□□ -0.27
PNKP-213ENST00000599543 A8MTW9 85 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 DUSP14O95147 198 aaKnown RBP13.33□□□□□ -0.28
PNKP-213ENST00000599543 HTN3P15516 51 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 CNN1P51911 297 aaKnown RBP13.33□□□□□ -0.28
PNKP-213ENST00000599543 ZNF266Q14584 549 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 FAM122CQ6P4D5 195 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 AMTNQ6UX39 209 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 ZNF331Q9NQX6 463 aaPredicted RBP13.33□□□□□ -0.28
PNKP-213ENST00000599543 RNF24Q9Y225 148 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 FUT9Q9Y231 359 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 PKHD1P08F94 4074 aa13.33□□□□□ -0.28
PNKP-213ENST00000599543 FAT2Q9NYQ8 4349 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 A0A1B0GVG6 124 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
PNKP-213ENST00000599543 INSP01308 110 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 OR10J4P0C629 311 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 PSG3Q16557 428 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 LCN15Q6UWW0 184 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 SAT2Q96F10 170 aaPredicted RBP13.32□□□□□ -0.28
PNKP-213ENST00000599543 DNAH2Q9P225 4427 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 HERC2O95714 4834 aa13.32□□□□□ -0.28
PNKP-213ENST00000599543 PRAC2D3DTV9 90 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 M0R2N4 97 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 M0R2Z0 102 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 DAD1P61803 113 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 ZNF503Q96F45 646 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
PNKP-213ENST00000599543 PLA2G2EQ9NZK7 142 aa13.31□□□□□ -0.28
PNKP-213ENST00000599543 OR7C2O60412 319 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 NDUFB4O95168 129 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 HIST1H1EP10412 219 aaKnown RBP13.3□□□□□ -0.28
PNKP-213ENST00000599543 CXCL2P19875 107 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
PNKP-213ENST00000599543 ACOT6Q3I5F7 207 aaPredicted RBP13.3□□□□□ -0.28
PNKP-213ENST00000599543 RPUSD4Q96CM3 377 aaKnown RBP13.3□□□□□ -0.28
PNKP-213ENST00000599543 PAXXQ9BUH6 204 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 OR51M1Q9H341 326 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 CYTL1Q9NRR1 136 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 TMEM14CQ9P0S9 112 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
PNKP-213ENST00000599543 TRBV19A0A075B6N1 114 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 M6PRP20645 277 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 RHOBP62745 196 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 EXOC3-AS1Q8N2X6 119 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 FXYD5Q96DB9 178 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 SLC50A1Q9BRV3 221 aa13.29□□□□□ -0.28
PNKP-213ENST00000599543 M0R3E3 92 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 CD300CQ08708 224 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 KCNRGQ8N5I3 272 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 RNF141Q8WVD5 230 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 NACAE9PAV3 2078 aa13.28□□□□□ -0.28
PNKP-213ENST00000599543 A0A1W2PPV4 95 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 PRSS29PA6NIE9 313 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 ZNF705GA8MUZ8 300 aaPredicted RBP13.27□□□□□ -0.29
PNKP-213ENST00000599543 BOLA2-SMG1P6H3BVE0 249 aa13.27□□□□□ -0.29
PNKP-213ENST00000599543 CRXO43186 299 aaPredicted RBP13.27□□□□□ -0.29
PNKP-213ENST00000599543 UBE2L3P68036 154 aaKnown RBP13.27□□□□□ -0.29
PNKP-213ENST00000599543 GUK1Q16774 197 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms