RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 HIST1H2BOP23527 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BBP33778 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BDP58876 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BCP62807 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.53
SYMPK-213ENST00000599460 C22orf34Q6ZV56 151 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 NUP35Q8NFH5 326 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 CUL9Q8IWT3 2517 aa11.71□□□□□ -0.53
SYMPK-213ENST00000599460 C19orf84I3L1E1 186 aa11.71□□□□□ -0.54
SYMPK-213ENST00000599460 THAP8Q8NA92 274 aa11.71□□□□□ -0.54
SYMPK-213ENST00000599460 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.54
SYMPK-213ENST00000599460 H3BRN7 92 aa11.71□□□□□ -0.54
SYMPK-213ENST00000599460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.544e-7■■■■□ 20.7
SYMPK-213ENST00000599460 LRP4O75096 1905 aa11.71□□□□□ -0.54
SYMPK-213ENST00000599460 INSP01308 110 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
SYMPK-213ENST00000599460 C1orf194Q5T5A4 169 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
SYMPK-213ENST00000599460 PCNX3Q9H6A9 2034 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 H7C2G1 150 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 JOSD1Q15040 202 aaPredicted RBP11.7□□□□□ -0.54
SYMPK-213ENST00000599460 OR11H2Q8NH07 326 aa11.7□□□□□ -0.54
SYMPK-213ENST00000599460 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
SYMPK-213ENST00000599460 UTRNP46939 3433 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 ELANEP08246 267 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 TRGV1A0A0A0MS02 117 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 NCR2O95944 276 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 COX6CP09669 75 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 NIT1Q86X76 327 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 NPBQ8NG41 125 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 TCTEX1D4Q5JR98 221 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 FNDC4Q9H6D8 234 aaPredicted RBP11.69□□□□□ -0.54
SYMPK-213ENST00000599460 C9JQL5 133 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
SYMPK-213ENST00000599460 NDUFA3O95167 84 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 C1QTNF4Q9BXJ3 329 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 D6R8Y8 96 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 HBDP02042 147 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 IFI27P40305 119 aaPredicted RBP11.68□□□□□ -0.54
SYMPK-213ENST00000599460 H3BUA1 57 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
SYMPK-213ENST00000599460 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 Q8N7P7 452 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 PTPRQQ9UMZ3 2332 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 RASL11AQ6T310 242 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 TMEM14CQ9P0S9 112 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 VCX2Q9H322 139 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
SYMPK-213ENST00000599460 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 HIST3H2BBQ8N257 126 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 H3BRM9 83 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 IGHV3-53P01767 116 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 EML6Q6ZMW3 1958 aa11.66□□□□□ -0.54
SYMPK-213ENST00000599460 C14orf178Q8N769 122 aaPredicted RBP11.65□□□□□ -0.54
SYMPK-213ENST00000599460 CHCHD1Q96BP2 118 aaKnown RBP11.65□□□□□ -0.54
SYMPK-213ENST00000599460 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 LAMTOR2Q9Y2Q5 125 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
SYMPK-213ENST00000599460 NCOA6Q14686 2063 aaPredicted RBP11.65□□□□□ -0.54
SYMPK-213ENST00000599460 PRR20EP86478 221 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 PRR20CP86479 221 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 PRR20DP86480 221 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 PRR20BP86481 221 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 PRR20AP86496 221 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 RIPPLY3P57055 190 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 C14orf144Q96I85 54 aa11.65□□□□□ -0.54
SYMPK-213ENST00000599460 BLCAPP62952 87 aa11.65□□□□□ -0.55
SYMPK-213ENST00000599460 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.55
SYMPK-213ENST00000599460 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.55
SYMPK-213ENST00000599460 SNAI2O43623 268 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 ODF3L1Q8IXM7 274 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 PRADC1Q9BSG0 188 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
SYMPK-213ENST00000599460 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 FXYD5Q96DB9 178 aa11.64□□□□□ -0.55
SYMPK-213ENST00000599460 PFN1P07737 140 aaKnown RBP11.63□□□□□ -0.55
SYMPK-213ENST00000599460 IGKV3D-20A0A0C4DH25 116 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms