RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 HIST1H1EP10412 219 aaKnown RBP11.92□□□□□ -0.5
USHBP1-208ENST00000598309 RPL12P30050 165 aaKnown RBP11.92□□□□□ -0.5
USHBP1-208ENST00000598309 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
USHBP1-208ENST00000598309 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
USHBP1-208ENST00000598309 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
USHBP1-208ENST00000598309 TSPOP30536 169 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 CDKN1BP46527 198 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 OXA1LQ15070 435 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 FAM222AQ5U5X8 452 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 ODF3Q96PU9 254 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 APLNQ9ULZ1 77 aa11.91□□□□□ -0.5
USHBP1-208ENST00000598309 YTHDF2Q9Y5A9 579 aaKnown RBP11.91□□□□□ -0.5
USHBP1-208ENST00000598309 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 PRAC2D3DTV9 90 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 IFNA5P01569 189 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 C20orf144Q9BQM9 153 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 NIPSNAP3BQ9BS92 247 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 PARD6GQ9BYG4 376 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-208ENST00000598309 PRELID1Q9Y255 219 aa11.9□□□□□ -0.5
USHBP1-208ENST00000598309 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 NDUFB4O95168 129 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 PYYP10082 97 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
USHBP1-208ENST00000598309 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 FUT9Q9Y231 359 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 HYDINQ4G0P3 5121 aa11.89□□□□□ -0.51
USHBP1-208ENST00000598309 ZNF705GA8MUZ8 300 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-208ENST00000598309 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
USHBP1-208ENST00000598309 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-208ENST00000598309 TAS2R60P59551 318 aa11.88□□□□□ -0.51
USHBP1-208ENST00000598309 SCGB1C1Q8TD33 95 aa11.88□□□□□ -0.51
USHBP1-208ENST00000598309 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
USHBP1-208ENST00000598309 MED28Q9H204 178 aa11.88□□□□□ -0.51
USHBP1-208ENST00000598309 LYRM9A8MSI8 78 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 FCN2Q15485 313 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 ASB13Q8WXK3 278 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 FAM210BQ96KR6 192 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 LINC01587Q99440 93 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 OR51M1Q9H341 326 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 AAMDCQ9H7C9 122 aa11.87□□□□□ -0.51
USHBP1-208ENST00000598309 H7BYZ3 331 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 M0R3E3 92 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 LEPP41159 167 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 FFAR4Q5NUL3 377 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
USHBP1-208ENST00000598309 PLAC8L1A1L4L8 177 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 CT45A10P0DMU9 189 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 DAD1P61803 113 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 GFI1BQ5VTD9 330 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 ZNF493Q6ZR52 646 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 C16orf74Q96GX8 76 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 NDUFAF3Q9BU61 184 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
USHBP1-208ENST00000598309 PRM2P04554 102 aa11.84□□□□□ -0.51
USHBP1-208ENST00000598309 EXOC3-AS1Q8N2X6 119 aa11.84□□□□□ -0.51
USHBP1-208ENST00000598309 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
USHBP1-208ENST00000598309 OR7C2O60412 319 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 GIPP09681 153 aaPredicted RBP11.83□□□□□ -0.52
USHBP1-208ENST00000598309 OR10J4P0C629 311 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 AZU1P20160 251 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 TAS2R45P59539 299 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 ZNF266Q14584 549 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 ICAM4Q14773 271 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 KHDC3LQ587J8 217 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 C9orf47Q6ZRZ4 202 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
USHBP1-208ENST00000598309 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 LINC00477Q96M19 166 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 AQP10Q96PS8 301 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
USHBP1-208ENST00000598309 UBE2L3P68036 154 aaKnown RBP11.82□□□□□ -0.52
USHBP1-208ENST00000598309 RGS21Q2M5E4 152 aa11.82□□□□□ -0.52
USHBP1-208ENST00000598309 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
USHBP1-208ENST00000598309 ZNF503Q96F45 646 aa11.82□□□□□ -0.52
USHBP1-208ENST00000598309 FAM19A4Q96LR4 140 aa11.82□□□□□ -0.52
USHBP1-208ENST00000598309 KLLNB2CW77 178 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
USHBP1-208ENST00000598309 P0DMU3 169 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 FAM231AP0DMU4 169 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 FAM231CP0DMU5 169 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 M6PRP20645 277 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-208ENST00000598309 PHYHIPLQ96FC7 376 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
USHBP1-208ENST00000598309 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
USHBP1-208ENST00000598309 C7orf71A4D174 169 aa11.8□□□□□ -0.52
USHBP1-208ENST00000598309 NMBP08949 121 aa11.8□□□□□ -0.52
USHBP1-208ENST00000598309 HTN1P15515 57 aa11.8□□□□□ -0.52
USHBP1-208ENST00000598309 HTN3P15516 51 aa11.8□□□□□ -0.52
USHBP1-208ENST00000598309 CRISP2P16562 243 aa11.8□□□□□ -0.52
USHBP1-208ENST00000598309 ERCC8Q13216 396 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms