RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 MORN3Q6PF18 240 aaPredicted RBP10.57□□□□□ -0.72
VRK3-213ENST00000597215 SSX7Q7RTT5 188 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 LYPD1Q8N2G4 141 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 TMEM167BQ9NRX6 74 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 RAB5CP51148 216 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 RANP62826 216 aaKnown RBP10.56□□□□□ -0.72
VRK3-213ENST00000597215 ICAM4Q14773 271 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 OR8A1Q8NGG7 326 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 FAM213BQ8TBF2 198 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
VRK3-213ENST00000597215 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
VRK3-213ENST00000597215 FHITP49789 147 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
VRK3-213ENST00000597215 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
VRK3-213ENST00000597215 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 SUN5Q8TC36 379 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 Q9H3A6 140 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 DNAH9Q9NYC9 4486 aa10.55□□□□□ -0.72
VRK3-213ENST00000597215 A8MTW9 85 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 M0R3E3 92 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 CA1P00915 261 aaPredicted RBP10.54□□□□□ -0.72
VRK3-213ENST00000597215 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 CNN1P51911 297 aaKnown RBP10.54□□□□□ -0.72
VRK3-213ENST00000597215 FAM74A1Q5RGS3 127 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 Q6ZWC4 215 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 OTORQ9NRC9 128 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
VRK3-213ENST00000597215 ZNF705DP0CH99 300 aaPredicted RBP10.53□□□□□ -0.72
VRK3-213ENST00000597215 ZNF705BP0CI00 300 aaPredicted RBP10.53□□□□□ -0.72
VRK3-213ENST00000597215 CSN1S1P47710 185 aa10.53□□□□□ -0.72
VRK3-213ENST00000597215 SULT1A2P50226 295 aa10.53□□□□□ -0.72
VRK3-213ENST00000597215 FGF8P55075 233 aaPredicted RBP10.53□□□□□ -0.72
VRK3-213ENST00000597215 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
VRK3-213ENST00000597215 TGP01266 2768 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 H2AFB1P0C5Y9 115 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.73
VRK3-213ENST00000597215 DEFB135Q30KP9 77 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 CMTM2Q8TAZ6 248 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 RXFP4Q8TDU9 374 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 TP53TG1Q9Y2A0 90 aa10.52□□□□□ -0.73
VRK3-213ENST00000597215 PGPA6NDG6 321 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 RETNQ9HD89 108 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
VRK3-213ENST00000597215 IGKV2-40A0A087WW87 121 aaPredicted RBP10.5□□□□□ -0.73
VRK3-213ENST00000597215 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 IGKV2D-40P01614 121 aaPredicted RBP10.5□□□□□ -0.73
VRK3-213ENST00000597215 AMBPP02760 352 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
VRK3-213ENST00000597215 FXYD7P58549 80 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 ARL6IP6Q8N6S5 226 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 RNF183Q96D59 192 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 SLC35B3Q9H1N7 401 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
VRK3-213ENST00000597215 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
VRK3-213ENST00000597215 RBAKDNA6NC62 111 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 TEX46H3BTG2 121 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 SPRY2O43597 315 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 SLC25A5P05141 298 aaKnown RBP10.49□□□□□ -0.73
VRK3-213ENST00000597215 C5orf17Q8NAS9 161 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 ODF3Q96PU9 254 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 U3KQK5 164 aa10.49□□□□□ -0.73
VRK3-213ENST00000597215 TRAV1-1A0A0B4J248 108 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 A0A1B0GV50 99 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 FAM74A7A6NL05 159 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 ZNF705EA8MWA4 302 aaPredicted RBP10.48□□□□□ -0.73
VRK3-213ENST00000597215 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 DIRC3C9JPN6 131 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 M0R2Z0 102 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 HBE1P02100 147 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 PPT1P50897 306 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 UBE2G2P60604 165 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 SUMO1P63165 101 aaKnown RBP10.48□□□□□ -0.73
VRK3-213ENST00000597215 ERCC8Q13216 396 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 SPINK13Q1W4C9 94 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 TMEM78Q5T7P6 136 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 NKX6-2Q9C056 277 aaPredicted RBP10.48□□□□□ -0.73
VRK3-213ENST00000597215 RPH3ALQ9UNE2 315 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms