RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 JTBO76095 146 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 MBP02144 154 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 OR10J4P0C629 311 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 ZNF705AQ6ZN79 300 aaPredicted RBP13.13□□□□□ -0.31
IRF3-216ENST00000597180 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 Q8NAQ8 132 aa13.13□□□□□ -0.31
IRF3-216ENST00000597180 AMBPP02760 352 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
IRF3-216ENST00000597180 MIFP14174 115 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 FAM122CQ6P4D5 195 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 PQLC2Q6ZP29 291 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 EXOC3-AS1Q8N2X6 119 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 RPP25LQ8N5L8 163 aaKnown RBP13.12□□□□□ -0.31
IRF3-216ENST00000597180 IL17DQ8TAD2 202 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
IRF3-216ENST00000597180 BOLA2-SMG1P6H3BVE0 249 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 M0R3E3 92 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 UBE2L3P68036 154 aaKnown RBP13.11□□□□□ -0.31
IRF3-216ENST00000597180 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 IGF2BP2-AS1Q96M15 143 aa13.11□□□□□ -0.31
IRF3-216ENST00000597180 A0A0D9SG52 128 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 CRXO43186 299 aaPredicted RBP13.1□□□□□ -0.31
IRF3-216ENST00000597180 EIF3GO75821 320 aaKnown RBP eCLIP13.1□□□□□ -0.31
IRF3-216ENST00000597180 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
IRF3-216ENST00000597180 ICAM4Q14773 271 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 CASC10Q5T4H9 136 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 NEU1Q99519 415 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 ARPC5LQ9BPX5 153 aa13.1□□□□□ -0.31
IRF3-216ENST00000597180 IGHV4-28A0A0C4DH34 117 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 NPIPB6E9PJ23 425 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 M0R2Z0 102 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 STAG3L2P0CL84 134 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 STAG3L3P0CL85 134 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 C1orf158Q8N1D5 194 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
IRF3-216ENST00000597180 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
IRF3-216ENST00000597180 RBMY1A1P0DJD3 496 aaKnown RBP13.08□□□□□ -0.32
IRF3-216ENST00000597180 RBMY1CP0DJD4 496 aa13.08□□□□□ -0.32
IRF3-216ENST00000597180 RBMY1FQ15415 496 aaKnown RBP13.08□□□□□ -0.32
IRF3-216ENST00000597180 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
IRF3-216ENST00000597180 PPP1R14DQ9NXH3 145 aa13.08□□□□□ -0.32
IRF3-216ENST00000597180 DEFB4AO15263 64 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
IRF3-216ENST00000597180 BCL2L11O43521 198 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 INSP01308 110 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 ARL14EPLP0DKL9 152 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 RANP62826 216 aaKnown RBP13.07□□□□□ -0.32
IRF3-216ENST00000597180 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 ACTR3CQ9C0K3 210 aaPredicted RBP13.07□□□□□ -0.32
IRF3-216ENST00000597180 Q9H3A6 140 aa13.07□□□□□ -0.32
IRF3-216ENST00000597180 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
IRF3-216ENST00000597180 CDKN1BP46527 198 aa13.06□□□□□ -0.32
IRF3-216ENST00000597180 ZFAND6Q6FIF0 208 aa13.06□□□□□ -0.32
IRF3-216ENST00000597180 SUN5Q8TC36 379 aa13.06□□□□□ -0.32
IRF3-216ENST00000597180 CSMD3Q7Z407 3707 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 IGHV3OR16-12A0A075B7B8 117 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 TSPOP30536 169 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 C9orf47Q6ZRZ4 202 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 TMUB2Q71RG4 321 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 SSX7Q7RTT5 188 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 LINC00477Q96M19 166 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 OTORQ9NRC9 128 aa13.05□□□□□ -0.32
IRF3-216ENST00000597180 CTXND1A0A1B0GTU2 59 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 C1QBP02746 253 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 GCHFRP30047 84 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 AKR1C8PQ5T2L2 129 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
IRF3-216ENST00000597180 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
IRF3-216ENST00000597180 CXorf1O96002 111 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
IRF3-216ENST00000597180 HBE1P02100 147 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 LEPP41159 167 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 CSN1S1P47710 185 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 ERCC8Q13216 396 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 AKAP14Q86UN6 197 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 TMEM256Q8N2U0 113 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 C11orf45Q8TAV5 145 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 C20orf144Q9BQM9 153 aa13.03□□□□□ -0.32
IRF3-216ENST00000597180 ZNF471Q9BX82 626 aaPredicted RBP13.03□□□□□ -0.32
IRF3-216ENST00000597180 TMEM189A5PLL7 270 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 SLC25A5P05141 298 aaKnown RBP13.02□□□□□ -0.33
IRF3-216ENST00000597180 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 KIR3DS1Q14943 382 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 ARL6IP6Q8N6S5 226 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 VGLL1Q99990 258 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 TMEM208Q9BTX3 173 aa13.02□□□□□ -0.33
IRF3-216ENST00000597180 TMEM167BQ9NRX6 74 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms