RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TRBV19A0A075B6N1 114 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 TRAV12-2A0A075B6T6 113 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 ZNF705GA8MUZ8 300 aaPredicted RBP7.48□□□□□ -1.21
CCDC9-203ENST00000596938 PRAC2D3DTV9 90 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 H3BTX0 84 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 SLC17A3O00476 420 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 HIST1H1EP10412 219 aaKnown RBP7.48□□□□□ -1.21
CCDC9-203ENST00000596938 CDKN1BP46527 198 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 TAS2R60P59551 318 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 LRRC37A5PQ49AS3 106 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 OR10J6PQ8NGY7 276 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 PPP1R1CQ8WVI7 109 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 MRPL53Q96EL3 112 aaKnown RBP7.48□□□□□ -1.21
CCDC9-203ENST00000596938 LINC01587Q99440 93 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 C20orf144Q9BQM9 153 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 ZNF586Q9NXT0 402 aa7.48□□□□□ -1.21
CCDC9-203ENST00000596938 SSNA1O43805 119 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 MPC2O95563 127 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 PRM2P04554 102 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 P0DMU3 169 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 AZU1P20160 251 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 PDE6HQ13956 83 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 THAP6Q8TBB0 222 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 WDR61Q9GZS3 305 aaKnown RBP7.47□□□□□ -1.21
CCDC9-203ENST00000596938 PRELID1Q9Y255 219 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 DNAH2Q9P225 4427 aa7.47□□□□□ -1.21
CCDC9-203ENST00000596938 PLAC8L1A1L4L8 177 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 NPIPB6E9PJ23 425 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 H7BYZ3 331 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 NDUFB4O95168 129 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 PET100P0DJ07 73 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 DAD1P61803 113 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 GCSAMLQ5JQS6 135 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 ZNF493Q6ZR52 646 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 POM121L12Q8N7R1 296 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 ODF3Q96PU9 254 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 KCNIP2Q9NS61 270 aa7.46□□□□□ -1.22
CCDC9-203ENST00000596938 CT45A10P0DMU9 189 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 PRB4P10163 310 aaPredicted RBP7.45□□□□□ -1.22
CCDC9-203ENST00000596938 CLINT1Q14677 625 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 C16orf74Q96GX8 76 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 FAM167A-AS1Q96KT0 104 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 LINC00477Q96M19 166 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 TIMM9Q9Y5J7 89 aa7.45□□□□□ -1.22
CCDC9-203ENST00000596938 CBY3A6NI87 242 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 C17orf112F2Z3M2 114 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 NBEAP1P0C6P0 100 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 PYYP10082 97 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 HTN1P15515 57 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 RPL12P30050 165 aaKnown RBP7.44□□□□□ -1.22
CCDC9-203ENST00000596938 LEPP41159 167 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 MIR17HGQ75NE6 70 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 ATP5SQ99766 215 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 SLC25A2Q9BXI2 301 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 MRPL32Q9BYC8 188 aaKnown RBP7.44□□□□□ -1.22
CCDC9-203ENST00000596938 OR51M1Q9H341 326 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 HSPB11Q9Y547 144 aa7.44□□□□□ -1.22
CCDC9-203ENST00000596938 TIMM8BQ9Y5J9 83 aaPredicted RBP7.44□□□□□ -1.22
CCDC9-203ENST00000596938 M0R3E3 92 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 DEFB130BP0DP73 79 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 DEFB130AP0DP74 79 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 HTN3P15516 51 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 FCN2Q15485 313 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 RNF212Q495C1 297 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 RNASE8Q8TDE3 154 aaKnown RBP7.43□□□□□ -1.22
CCDC9-203ENST00000596938 TMEM263Q8WUH6 116 aaKnown RBP7.43□□□□□ -1.22
CCDC9-203ENST00000596938 BLNKQ8WV28 456 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 PARD6GQ9BYG4 376 aaPredicted RBP7.43□□□□□ -1.22
CCDC9-203ENST00000596938 AAMDCQ9H7C9 122 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 FUT9Q9Y231 359 aa7.43□□□□□ -1.22
CCDC9-203ENST00000596938 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 PTTG1O95997 202 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 IFNA5P01569 189 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 SLC25A5P05141 298 aaKnown RBP7.42□□□□□ -1.22
CCDC9-203ENST00000596938 NMBP08949 121 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 ICAM4Q14773 271 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 TMEM88Q6PEY1 159 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 C9orf47Q6ZRZ4 202 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 LYPD1Q8N2G4 141 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 EXOC3-AS1Q8N2X6 119 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 C15orf53Q8NAA6 179 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 FXYD5Q96DB9 178 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 PAXXQ9BUH6 204 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 AGPAT4-IT1Q9H0P7 198 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 MBD2Q9UBB5 411 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 DNAH17Q9UFH2 4485 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 HECTD4Q9Y4D8 3996 aa7.42□□□□□ -1.22
CCDC9-203ENST00000596938 TRAV12-3A0A0B4J271 114 aa7.41□□□□□ -1.22
CCDC9-203ENST00000596938 KLLNB2CW77 178 aa7.41□□□□□ -1.22
CCDC9-203ENST00000596938 ZNF324O75467 553 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms