RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
VRK3-211ENST00000596445 PHYHIPLQ96FC7 376 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 CLUHP3Q96NS8 147 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 ASCL2Q99929 193 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 AAMDCQ9H7C9 122 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 PLA2G2EQ9NZK7 142 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 TENM3Q9P273 2699 aa6.15□□□□□ -1.43
VRK3-211ENST00000596445 A8MTW9 85 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
VRK3-211ENST00000596445 F6UB75 175 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 DUSP14O95147 198 aaKnown RBP6.14□□□□□ -1.43
VRK3-211ENST00000596445 GCHFRP30047 84 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 FHITP49789 147 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 RAB5CP51148 216 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 NUTF2P61970 127 aaKnown RBP6.14□□□□□ -1.43
VRK3-211ENST00000596445 RANP62826 216 aaKnown RBP6.14□□□□□ -1.43
VRK3-211ENST00000596445 ICAM4Q14773 271 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 EXOC3-AS1Q8N2X6 119 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 OR8A1Q8NGG7 326 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 FAM213BQ8TBF2 198 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 TM2D3Q9BRN9 247 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 Q9H3A6 140 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 ZMAT4Q9H898 229 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 TMEM167BQ9NRX6 74 aa6.14□□□□□ -1.43
VRK3-211ENST00000596445 MAP1LC3B2A6NCE7 125 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 M0R3E3 92 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 CA1P00915 261 aaPredicted RBP6.13□□□□□ -1.43
VRK3-211ENST00000596445 IGKV3-20P01619 116 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 SULT1A2P50226 295 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 CNN1P51911 297 aaKnown RBP6.13□□□□□ -1.43
VRK3-211ENST00000596445 HIST1H1AQ02539 215 aaPredicted RBP6.13□□□□□ -1.43
VRK3-211ENST00000596445 Q6ZWC4 215 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 OR10J6PQ8NGY7 276 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 SFT2D1Q8WV19 159 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 MBD3L1Q8WWY6 194 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 SPATA25Q9BR10 227 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 MAP1LC3BQ9GZQ8 125 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 OTORQ9NRC9 128 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 DNAH9Q9NYC9 4486 aa6.13□□□□□ -1.43
VRK3-211ENST00000596445 PRAC2D3DTV9 90 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
VRK3-211ENST00000596445 H2AFB1P0C5Y9 115 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 ZNF705DP0CH99 300 aaPredicted RBP6.12□□□□□ -1.43
VRK3-211ENST00000596445 ZNF705BP0CI00 300 aaPredicted RBP6.12□□□□□ -1.43
VRK3-211ENST00000596445 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
VRK3-211ENST00000596445 CSN1S1P47710 185 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 FGF8P55075 233 aaPredicted RBP6.12□□□□□ -1.43
VRK3-211ENST00000596445 FAM74A1Q5RGS3 127 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 IQCF2Q8IXL9 164 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 ARL6IP6Q8N6S5 226 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 C1QTNF4Q9BXJ3 329 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 TMPRSS5Q9H3S3 457 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 TP53TG1Q9Y2A0 90 aa6.12□□□□□ -1.43
VRK3-211ENST00000596445 STAB2Q8WWQ8 2551 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 TRAV1-1A0A0B4J248 108 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 A0A1W2PRE2 83 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 RBAKDNA6NC62 111 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 PGPA6NDG6 321 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 BOLA2-SMG1P6H3BVE0 249 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 SPRY2O43597 315 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 DEFB135Q30KP9 77 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 CMTM2Q8TAZ6 248 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 RNF183Q96D59 192 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 LINC00477Q96M19 166 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 RCHY1Q96PM5 261 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 OVOL2Q9BRP0 275 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 SLC35B3Q9H1N7 401 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 PPP1R14DQ9NXH3 145 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 XCL2Q9UBD3 114 aa6.11□□□□□ -1.43
VRK3-211ENST00000596445 IGKV2-40A0A087WW87 121 aaPredicted RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 GGTLC3B5MD39 225 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 IGKV2D-40P01614 121 aaPredicted RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 AMBPP02760 352 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 FXYD7P58549 80 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 SUMO1P63165 101 aaKnown RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 ERCC8Q13216 396 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 C5orf17Q8NAS9 161 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 CSNK1G2-AS1Q8NCQ2 148 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 ODF3Q96PU9 254 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 NKX6-2Q9C056 277 aaPredicted RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 RETNQ9HD89 108 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 YTHDF2Q9Y5A9 579 aaKnown RBP6.1□□□□□ -1.43
VRK3-211ENST00000596445 U3KQK5 164 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 ARL2-SNX15V9GYD0 113 aa6.1□□□□□ -1.43
VRK3-211ENST00000596445 HUWE1Q7Z6Z7 4374 aaKnown RBP6.09□□□□□ -1.43
VRK3-211ENST00000596445 A0A1B0GV50 99 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 SERTM2A0A1B0GWG4 89 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 FAM74A7A6NL05 159 aa6.09□□□□□ -1.43
VRK3-211ENST00000596445 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms