RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 BLNKQ8WV28 456 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 SLC50A1Q9BRV3 221 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 TUBA4BQ9H853 241 aa7.73□□□□□ -1.17
LIG1-210ENST00000596332 LOC102724200A0A096LPH7 203 aaPredicted RBP7.72□□□□□ -1.17
LIG1-210ENST00000596332 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 A0A1W2PPV4 95 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 OR7C2O60412 319 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 IFNA7P01567 189 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 GCHFRP30047 84 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 KHDC3LQ587J8 217 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 PQLC2Q6ZP29 291 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 OR8A1Q8NGG7 326 aa7.72□□□□□ -1.17
LIG1-210ENST00000596332 ACTR3CQ9C0K3 210 aaPredicted RBP7.72□□□□□ -1.17
LIG1-210ENST00000596332 KIR2DL5BA0A0G2JN68 375 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 KIR2DL5BA0A0G2JPC4 375 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 CRXO43186 299 aaPredicted RBP7.71□□□□□ -1.18
LIG1-210ENST00000596332 SULT1A2P50226 295 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 FGF8P55075 233 aaPredicted RBP7.71□□□□□ -1.18
LIG1-210ENST00000596332 TAS2R45P59539 299 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
LIG1-210ENST00000596332 CCL20P78556 96 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 ICAM4Q14773 271 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 FAM74A1Q5RGS3 127 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 SAMD13Q5VXD3 122 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 KIR2DL5AQ8N109 375 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 RPUSD4Q96CM3 377 aaKnown RBP7.71□□□□□ -1.18
LIG1-210ENST00000596332 FAM19A4Q96LR4 140 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 OVOL2Q9BRP0 275 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 Q9H3A6 140 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 RETNQ9HD89 108 aa7.71□□□□□ -1.18
LIG1-210ENST00000596332 LINC00862A6NCI5 91 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 UMAD1C9J7I0 102 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 CXorf1O96002 111 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 CNN1P51911 297 aaKnown RBP7.7□□□□□ -1.18
LIG1-210ENST00000596332 RAB14P61106 215 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 EIF5AP63241 154 aaKnown RBP7.7□□□□□ -1.18
LIG1-210ENST00000596332 UBE2L3P68036 154 aaKnown RBP7.7□□□□□ -1.18
LIG1-210ENST00000596332 PSG9Q00887 426 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 KIR3DS1Q14943 382 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 AKR1C8PQ5T2L2 129 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 LYPD1Q8N2G4 141 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 MRPL53Q96EL3 112 aaKnown RBP7.7□□□□□ -1.18
LIG1-210ENST00000596332 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 CSTL1Q9H114 145 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 SLC35B3Q9H1N7 401 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 YTHDF2Q9Y5A9 579 aaKnown RBP7.7□□□□□ -1.18
LIG1-210ENST00000596332 STAB2Q8WWQ8 2551 aa7.7□□□□□ -1.18
LIG1-210ENST00000596332 TRAV1-1A0A0B4J248 108 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 MAP1LC3B2A6NCE7 125 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 GGTLC3B5MD39 225 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 IGKV3-20P01619 116 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 CT45A10P0DMU9 189 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 ERCC8Q13216 396 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 DPPA3Q6W0C5 159 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 Q6ZWC4 215 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 STHQ8IWL8 128 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 CCDC28AQ8IWP9 274 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 ZNF738Q8NE65 137 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 FAM213BQ8TBF2 198 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 LRRC20Q8TCA0 184 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 RNF183Q96D59 192 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 VGLL1Q99990 258 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 MAP1LC3BQ9GZQ8 125 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 CLEC5AQ9NY25 188 aa7.69□□□□□ -1.18
LIG1-210ENST00000596332 PGPA6NDG6 321 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 UBE2CO00762 179 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 NHLRC4P0CG21 123 aaPredicted RBP7.68□□□□□ -1.18
LIG1-210ENST00000596332 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
LIG1-210ENST00000596332 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 FXYD7P58549 80 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
LIG1-210ENST00000596332 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 TEX261Q6UWH6 196 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 ALKAL2Q6UX46 152 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 ARL6IP6Q8N6S5 226 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 OR4B1Q8NGF8 309 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 TVP23CQ96ET8 276 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 OTORQ9NRC9 128 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 PRELID1Q9Y255 219 aa7.68□□□□□ -1.18
LIG1-210ENST00000596332 IGKV2-40A0A087WW87 121 aaPredicted RBP7.67□□□□□ -1.18
LIG1-210ENST00000596332 A0A1W2PRE2 83 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 FAM74A7A6NL05 159 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 DIRC3C9JPN6 131 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 IGKV2D-40P01614 121 aaPredicted RBP7.67□□□□□ -1.18
LIG1-210ENST00000596332 IGLV2-11P01706 119 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 RAB5CP51148 216 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 HIST1H1AQ02539 215 aaPredicted RBP7.67□□□□□ -1.18
LIG1-210ENST00000596332 DEFB135Q30KP9 77 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 EBLN2Q6P2I7 272 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 MORN3Q6PF18 240 aaPredicted RBP7.67□□□□□ -1.18
LIG1-210ENST00000596332 ZNF680Q8NEM1 530 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 SFT2D1Q8WV19 159 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 X6R8D5 127 aa7.67□□□□□ -1.18
LIG1-210ENST00000596332 ZNF705EA8MWA4 302 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms