RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 MRPL32Q9BYC8 188 aaKnown RBP8.02□□□□□ -1.13
VRK3-210ENST00000596121 OR51M1Q9H341 326 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 KCNIP2Q9NS61 270 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 CELA1Q9UNI1 258 aa8.02□□□□□ -1.13
VRK3-210ENST00000596121 CXorf65A6NEN9 183 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 NBEAP1P0C6P0 100 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 ATP6V0CP27449 155 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 RPL7L1Q6DKI1 246 aaKnown RBP8.01□□□□□ -1.13
VRK3-210ENST00000596121 Q6ZNX1 250 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 HSD17B11Q8NBQ5 300 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 OR11H4Q8NGC9 324 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 C11orf45Q8TAV5 145 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 RNF141Q8WVD5 230 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 IGF2BP2-AS1Q96M15 143 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 NEU1Q99519 415 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 PAXXQ9BUH6 204 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 SH3BGRL3Q9H299 93 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 TIMM9Q9Y5J7 89 aa8.01□□□□□ -1.13
VRK3-210ENST00000596121 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
VRK3-210ENST00000596121 RHOBP62745 196 aa8□□□□□ -1.13
VRK3-210ENST00000596121 ERCC8Q13216 396 aa8□□□□□ -1.13
VRK3-210ENST00000596121 PDE6HQ13956 83 aa8□□□□□ -1.13
VRK3-210ENST00000596121 CEMP1Q6PRD7 247 aaPredicted RBP8□□□□□ -1.13
VRK3-210ENST00000596121 ZNF767PQ75MW2 155 aa8□□□□□ -1.13
VRK3-210ENST00000596121 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
VRK3-210ENST00000596121 PHYHIPLQ96FC7 376 aa8□□□□□ -1.13
VRK3-210ENST00000596121 CYTL1Q9NRR1 136 aa8□□□□□ -1.13
VRK3-210ENST00000596121 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
VRK3-210ENST00000596121 HYDINQ4G0P3 5121 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 LCE6AA0A183 80 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
VRK3-210ENST00000596121 ARPC5O15511 151 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 M6PRP20645 277 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 ICAM4Q14773 271 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 C12orf74Q32Q52 190 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 FAM122CQ6P4D5 195 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 RPP25LQ8N5L8 163 aaKnown RBP7.99□□□□□ -1.13
VRK3-210ENST00000596121 INO80EQ8NBZ0 244 aaPredicted RBP7.99□□□□□ -1.13
VRK3-210ENST00000596121 PHLDA1Q8WV24 401 aaPredicted RBP7.99□□□□□ -1.13
VRK3-210ENST00000596121 AGPAT4-IT1Q9H0P7 198 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 PLA2G2EQ9NZK7 142 aa7.99□□□□□ -1.13
VRK3-210ENST00000596121 ZNF705GA8MUZ8 300 aaPredicted RBP7.98□□□□□ -1.13
VRK3-210ENST00000596121 OR7C2O60412 319 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 AMBPP02760 352 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 AZU1P20160 251 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 EMP1P54849 157 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 ZNF266Q14584 549 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
VRK3-210ENST00000596121 SSX7Q7RTT5 188 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 OR10G4Q8NGN3 311 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 OR10G9Q8NGN4 311 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 OR10G7Q8NGN6 311 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 MRPL53Q96EL3 112 aaKnown RBP7.98□□□□□ -1.13
VRK3-210ENST00000596121 PSMG3Q9BT73 122 aaPredicted RBP7.98□□□□□ -1.13
VRK3-210ENST00000596121 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
VRK3-210ENST00000596121 IGKV2-40A0A087WW87 121 aaPredicted RBP7.97□□□□□ -1.13
VRK3-210ENST00000596121 PLAC8L1A1L4L8 177 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 SMIM9A6NGZ8 99 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 INSP01308 110 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 IGKV2D-40P01614 121 aaPredicted RBP7.97□□□□□ -1.13
VRK3-210ENST00000596121 CDKN1BP46527 198 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 RANP62826 216 aaKnown RBP7.97□□□□□ -1.13
VRK3-210ENST00000596121 UBE2L3P68036 154 aaKnown RBP7.97□□□□□ -1.13
VRK3-210ENST00000596121 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 Q6ZTC4 211 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 OR10J6PQ8NGY7 276 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 FAM19A4Q96LR4 140 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 VGLL1Q99990 258 aa7.97□□□□□ -1.13
VRK3-210ENST00000596121 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.13
VRK3-210ENST00000596121 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 NUPR2A6NF83 97 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 J3KRW8 73 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 HBE1P02100 147 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 ZNF726P1Q15940 193 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 KHDC3LQ587J8 217 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 Q6ZQT7 251 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 RAB24Q969Q5 203 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 Q9H3A6 140 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 PPP1R14DQ9NXH3 145 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 DKK2Q9UBU2 259 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 PRELID1Q9Y255 219 aa7.96□□□□□ -1.14
VRK3-210ENST00000596121 A0A1W2PPV4 95 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 ARL14EPLP0DKL9 152 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 CDC34P49427 236 aaPredicted RBP7.95□□□□□ -1.14
VRK3-210ENST00000596121 TAS2R45P59539 299 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 SERF2P84101 59 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 PRR9Q5T870 116 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 FAM222AQ5U5X8 452 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 KCNRGQ8N5I3 272 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 ODF3Q96PU9 254 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 LINC01587Q99440 93 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 TMEM208Q9BTX3 173 aa7.95□□□□□ -1.14
VRK3-210ENST00000596121 AAMDCQ9H7C9 122 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms