RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
LIG1-209ENST00000596104 TRAV12-3A0A0B4J271 114 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 NPIPB6E9PJ23 425 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 H3BQ15 152 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 J3KRW8 73 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 METTL15P1P0C7V9 234 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 IGLC2P0DOY2 106 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 AP3S2P59780 193 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 TEPPQ6URK8 271 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 LINC00305Q7Z4B0 112 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 BPIFA4PQ86YQ2 179 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 TOMM5Q8N4H5 51 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 RAB2BQ8WUD1 216 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 MRPS26Q9BYN8 205 aaKnown RBP6.8□□□□□ -1.32
LIG1-209ENST00000596104 GSN-AS1Q9NRJ2 163 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 PTTG2Q9NZH5 202 aa6.8□□□□□ -1.32
LIG1-209ENST00000596104 MYCBP2O75592 4640 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 A0A087WTM6 91 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 EREGO14944 169 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 SSSCA1O60232 199 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 NXPH4O95158 308 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 DNAH10OSP0CZ25 163 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 LEPP41159 167 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 ARL16Q0P5N6 197 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 OPCMLQ14982 345 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 ZNF546Q86UE3 836 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 OR10P1Q8NGE3 313 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 MCFD2Q8NI22 146 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 DEDD2Q8WXF8 326 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 FRZBQ92765 325 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 BCL7BQ9BQE9 202 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 PXMP4Q9Y6I8 212 aa6.79□□□□□ -1.32
LIG1-209ENST00000596104 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
LIG1-209ENST00000596104 C9orf170A2RU37 121 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 GOSR2O14653 212 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 AGPAT2O15120 278 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 ZNF324O75467 553 aaPredicted RBP6.78□□□□□ -1.32
LIG1-209ENST00000596104 SLC25A5P05141 298 aaKnown RBP6.78□□□□□ -1.32
LIG1-209ENST00000596104 TMBIM6P55061 237 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 UBE2MP61081 183 aaKnown RBP6.78□□□□□ -1.32
LIG1-209ENST00000596104 ZNF680Q8NEM1 530 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 MGST2Q99735 147 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 MGAT4CQ9UBM8 478 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 V9GYH0 126 aa6.78□□□□□ -1.32
LIG1-209ENST00000596104 TRGV1A0A0A0MS02 117 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 C7orf71A4D174 169 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 KLLNB2CW77 178 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 PAX4O43316 350 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 SPINK4O60575 86 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 TSC22D2O75157 780 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 TCL1AP56279 114 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 TAS2R30P59541 319 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 PYDC2Q56P42 97 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 FAM19A4Q96LR4 140 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 GGACTQ9BVM4 153 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 RCL1Q9Y2P8 373 aaKnown RBP6.77□□□□□ -1.33
LIG1-209ENST00000596104 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
LIG1-209ENST00000596104 TRAV5A0A0B4J249 113 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 H3BMQ9 156 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 M0R3E3 92 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 ZNF253O75346 499 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
LIG1-209ENST00000596104 CD300CQ08708 224 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 BTN1A1Q13410 526 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 ICAM4Q14773 271 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 GUK1Q16774 197 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 LYPD5Q6UWN5 251 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 EIF4E3Q8N5X7 224 aaKnown RBP6.76□□□□□ -1.33
LIG1-209ENST00000596104 MRPL53Q96EL3 112 aaKnown RBP6.76□□□□□ -1.33
LIG1-209ENST00000596104 ST6GAL2Q96JF0 529 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
LIG1-209ENST00000596104 C7orf66A4D0T2 115 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 NDUFB6O95139 128 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 SCGB1D2O95969 90 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 IFNA5P01569 189 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 OR4E1P0C645 316 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 CRYBA4P53673 196 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 ERCC8Q13216 396 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 IAH1Q2TAA2 248 aaPredicted RBP6.75□□□□□ -1.33
LIG1-209ENST00000596104 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
LIG1-209ENST00000596104 VGLL1Q99990 258 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 AGPAT4-IT1Q9H0P7 198 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 PRO0255Q9UI72 69 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 FLVCR2Q9UPI3 526 aa6.75□□□□□ -1.33
LIG1-209ENST00000596104 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
LIG1-209ENST00000596104 TRBV19A0A075B6N1 114 aa6.74□□□□□ -1.33
LIG1-209ENST00000596104 NDUFB4O95168 129 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms