RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
LIG1-208ENST00000595758 PRB4P10163 310 aaPredicted RBP10.49□□□□□ -0.73
LIG1-208ENST00000595758 CNN1P51911 297 aaKnown RBP10.49□□□□□ -0.73
LIG1-208ENST00000595758 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
LIG1-208ENST00000595758 PQLC2Q6ZP29 291 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 RAB24Q969Q5 203 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 HYLS1Q96M11 299 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 XCL2Q9UBD3 114 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 PRELID1Q9Y255 219 aa10.49□□□□□ -0.73
LIG1-208ENST00000595758 A8MTW9 85 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 PRAC2D3DTV9 90 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 FXYD7P58549 80 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
LIG1-208ENST00000595758 CD300CQ08708 224 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 LGALSLQ3ZCW2 172 aaPredicted RBP10.48□□□□□ -0.73
LIG1-208ENST00000595758 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
LIG1-208ENST00000595758 PHYHIPLQ96FC7 376 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
LIG1-208ENST00000595758 M0R3E3 92 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 ARL14EPLP0DKL9 152 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 RANP62826 216 aaKnown RBP10.47□□□□□ -0.73
LIG1-208ENST00000595758 ICAM4Q14773 271 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 AMTNQ6UX39 209 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 OR10J6PQ8NGY7 276 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 RARRES2Q99969 163 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
LIG1-208ENST00000595758 SEC11BP0C7V7 166 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 ZFP69Q49AA0 526 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 BAP18Q8IXM2 172 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 CSNK1G2-AS1Q8NCQ2 148 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 OR11H2Q8NH07 326 aa10.46□□□□□ -0.73
LIG1-208ENST00000595758 CTXND1A0A1B0GTU2 59 aa10.45□□□□□ -0.74
LIG1-208ENST00000595758 CXorf1O96002 111 aa10.45□□□□□ -0.74
LIG1-208ENST00000595758 TPT1P13693 172 aaKnown RBP10.45□□□□□ -0.74
LIG1-208ENST00000595758 GCHFRP30047 84 aa10.45□□□□□ -0.74
LIG1-208ENST00000595758 Q9H3A6 140 aa10.45□□□□□ -0.74
LIG1-208ENST00000595758 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
LIG1-208ENST00000595758 BOLA2-SMG1P6H3BVE0 249 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 AMBPP02760 352 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 CSN1S1P47710 185 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 SPINK13Q1W4C9 94 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 SSX7Q7RTT5 188 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
LIG1-208ENST00000595758 UMAD1C9J7I0 102 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 NPIPB6E9PJ23 425 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 M0R2Z0 102 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 IQCF2Q8IXL9 164 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 C9orf62Q8N4C0 152 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 TMED6Q8WW62 240 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 IGF2BP2-AS1Q96M15 143 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 OTORQ9NRC9 128 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 TMEM167BQ9NRX6 74 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 PLA2G2EQ9NZK7 142 aa10.43□□□□□ -0.74
LIG1-208ENST00000595758 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 PGPA6NDG6 321 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 ZNF705EA8MWA4 302 aaPredicted RBP10.42□□□□□ -0.74
LIG1-208ENST00000595758 CT45A10P0DMU9 189 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 TSPOP30536 169 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 ERCC8Q13216 396 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 FAM74A1Q5RGS3 127 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
LIG1-208ENST00000595758 RXFP4Q8TDU9 374 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 LINC00477Q96M19 166 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 GOLT1BQ9Y3E0 138 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 X6R8D5 127 aa10.42□□□□□ -0.74
LIG1-208ENST00000595758 IGHV3OR16-12A0A075B7B8 117 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 IGKV2-40A0A087WW87 121 aaPredicted RBP10.41□□□□□ -0.74
LIG1-208ENST00000595758 MAP1LC3B2A6NCE7 125 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 INSP01308 110 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 IGKV2D-40P01614 121 aaPredicted RBP10.41□□□□□ -0.74
LIG1-208ENST00000595758 CDKN1BP46527 198 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 FHITP49789 147 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
LIG1-208ENST00000595758 ZNF705AQ6ZN79 300 aaPredicted RBP10.41□□□□□ -0.74
LIG1-208ENST00000595758 SLC51BQ86UW2 128 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 CMTM2Q8TAZ6 248 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 FAM213BQ8TBF2 198 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 MAP1LC3BQ9GZQ8 125 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 AGPAT4-IT1Q9H0P7 198 aa10.41□□□□□ -0.74
LIG1-208ENST00000595758 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 CRXO43186 299 aaPredicted RBP10.4□□□□□ -0.74
LIG1-208ENST00000595758 MIFP14174 115 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 LEPP41159 167 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 DPPA3Q6W0C5 159 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 C1orf158Q8N1D5 194 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 VGLL1Q99990 258 aa10.4□□□□□ -0.74
LIG1-208ENST00000595758 TMEM208Q9BTX3 173 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms