RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 HLA-DRB1P01911 266 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
ZNF541-205ENST00000595558 USP9YO00507 2555 aaPredicted RBP12.03□□□□□ -0.48
ZNF541-205ENST00000595558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF541-205ENST00000595558 HSBP1L1C9JCN9 74 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 ZNF747Q9BV97 191 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 A0A096LNJ9 63 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 SERTM2A0A1B0GWG4 89 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 H3BRN7 92 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 PSG3Q16557 428 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 ZNF414Q96IQ9 312 aa12.03□□□□□ -0.48
ZNF541-205ENST00000595558 MRPS12O15235 138 aaKnown RBP12.02□□□□□ -0.49
ZNF541-205ENST00000595558 PAX2Q02962 417 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 TMEM75Q8N9X5 138 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 TNFRSF14Q92956 283 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 SELENOKQ9Y6D0 94 aa12.02□□□□□ -0.49
ZNF541-205ENST00000595558 K7EP13 123 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 RIGQ13278 110 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 C2orf91Q6ZV80 131 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 DEFB125Q8N687 156 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 FAM208BQ5VWN6 2430 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 D6R8Y8 96 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 UQCRFS1P47985 274 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 LYZL1Q6UWQ5 148 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 DYNAPQ8N1N2 210 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
ZNF541-205ENST00000595558 LY6LH3BQJ8 138 aa12□□□□□ -0.49
ZNF541-205ENST00000595558 RNF151Q2KHN1 245 aa12□□□□□ -0.49
ZNF541-205ENST00000595558 IGHV3OR16-8A0A075B7F1 116 aa12□□□□□ -0.49
ZNF541-205ENST00000595558 FA2HQ7L5A8 372 aa12□□□□□ -0.49
ZNF541-205ENST00000595558 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
ZNF541-205ENST00000595558 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
ZNF541-205ENST00000595558 HES1Q14469 280 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 ANKRD39Q53RE8 183 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 SIGLEC8Q9NYZ4 499 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 CSPG4Q6UVK1 2322 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 TRAV30A0A087WSZ9 112 aa11.99□□□□□ -0.49
ZNF541-205ENST00000595558 TRAV8-6A0A0B4J262 113 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 TRBV6-1A0A0K0K1D8 114 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 ZFP36P26651 326 aaKnown RBP11.98□□□□□ -0.49
ZNF541-205ENST00000595558 GPR183P32249 361 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 KLRB1Q12918 225 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 Q8TAT8 98 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 RHOGP84095 191 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 PSG9Q00887 426 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 C12orf54Q6X4T0 127 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 LRRK2Q5S007 2527 aa11.98□□□□□ -0.49
ZNF541-205ENST00000595558 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 SH2D1AO60880 128 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 COX8AP10176 69 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 WFDC3Q8IUB2 231 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 F8W735 103 aaPredicted RBP11.97□□□□□ -0.49
ZNF541-205ENST00000595558 HLA-DMBP28068 263 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 HIST1H1AQ02539 215 aaPredicted RBP11.97□□□□□ -0.49
ZNF541-205ENST00000595558 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
ZNF541-205ENST00000595558 WI2-2373I1.2A0A1W2PRP0 233 aa11.96□□□□□ -0.49
ZNF541-205ENST00000595558 K7EQM0 130 aa11.96□□□□□ -0.49
ZNF541-205ENST00000595558 GNG7O60262 68 aa11.96□□□□□ -0.49
ZNF541-205ENST00000595558 GATD1Q8NB37 220 aa11.96□□□□□ -0.49
ZNF541-205ENST00000595558 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.49
ZNF541-205ENST00000595558 GAS8-AS1O95177 125 aa11.96□□□□□ -0.5
ZNF541-205ENST00000595558 CSN1S1P47710 185 aa11.96□□□□□ -0.5
ZNF541-205ENST00000595558 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.5
ZNF541-205ENST00000595558 NDPQ00604 133 aa11.96□□□□□ -0.5
ZNF541-205ENST00000595558 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 NBR2O15453 112 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 CT45A10P0DMU9 189 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 FGF6P10767 208 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 MRPL51Q4U2R6 128 aaKnown RBP11.95□□□□□ -0.5
ZNF541-205ENST00000595558 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 C19orf84I3L1E1 186 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
ZNF541-205ENST00000595558 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 ZNF493Q6ZR52 646 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 ZNF575Q86XF7 245 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 CFHR4Q92496 578 aa11.95□□□□□ -0.5
ZNF541-205ENST00000595558 NAA38Q9BRA0 125 aaKnown RBP11.95□□□□□ -0.5
ZNF541-205ENST00000595558 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
ZNF541-205ENST00000595558 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 CDKN1BP46527 198 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 CACNG7P62955 275 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 LYPD1Q8N2G4 141 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 VGLL1Q99990 258 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
ZNF541-205ENST00000595558 UBTD1Q9HAC8 227 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms