RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 NDUFAF3Q9BU61 184 aa11.4□□□□□ -0.58
IRF3-210ENST00000595240 PPP1R14DQ9NXH3 145 aa11.4□□□□□ -0.58
IRF3-210ENST00000595240 ZNF586Q9NXT0 402 aa11.4□□□□□ -0.58
IRF3-210ENST00000595240 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
IRF3-210ENST00000595240 TMEM14CQ9P0S9 112 aa11.4□□□□□ -0.58
IRF3-210ENST00000595240 ZNF253O75346 499 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 CDKN1BP46527 198 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 OR10J6PQ8NGY7 276 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 PPP1R1CQ8WVI7 109 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
IRF3-210ENST00000595240 TRBV19A0A075B6N1 114 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 SSNA1O43805 119 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 CLINT1Q14677 625 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 GCSAMLQ5JQS6 135 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 FRAS1Q86XX4 4008 aa11.38□□□□□ -0.59
IRF3-210ENST00000595240 AZU1P20160 251 aa11.37□□□□□ -0.59
IRF3-210ENST00000595240 TAS2R60P59551 318 aa11.37□□□□□ -0.59
IRF3-210ENST00000595240 LINC01587Q99440 93 aa11.37□□□□□ -0.59
IRF3-210ENST00000595240 WDR61Q9GZS3 305 aaKnown RBP11.37□□□□□ -0.59
IRF3-210ENST00000595240 LYRM9A8MSI8 78 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 NDUFB4O95168 129 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 MPC2O95563 127 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 HIST1H1EP10412 219 aaKnown RBP11.36□□□□□ -0.59
IRF3-210ENST00000595240 DAD1P61803 113 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
IRF3-210ENST00000595240 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 DNAH10Q8IVF4 4471 aa11.36□□□□□ -0.59
IRF3-210ENST00000595240 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 PET100P0DJ07 73 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 P0DMU3 169 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 FAM231AP0DMU4 169 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 PYYP10082 97 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 HTN3P15516 51 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 PDE6HQ13956 83 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 C20orf144Q9BQM9 153 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 SLC25A2Q9BXI2 301 aa11.35□□□□□ -0.59
IRF3-210ENST00000595240 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
IRF3-210ENST00000595240 H7BYZ3 331 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 M0R3E3 92 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 CT45A10P0DMU9 189 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 C16orf74Q96GX8 76 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 ATP5SQ99766 215 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
IRF3-210ENST00000595240 HTN1P15515 57 aa11.33□□□□□ -0.6
IRF3-210ENST00000595240 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
IRF3-210ENST00000595240 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
IRF3-210ENST00000595240 RNASE8Q8TDE3 154 aaKnown RBP11.33□□□□□ -0.6
IRF3-210ENST00000595240 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.6
IRF3-210ENST00000595240 C17orf112F2Z3M2 114 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
IRF3-210ENST00000595240 LEPP41159 167 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 FCN2Q15485 313 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
IRF3-210ENST00000595240 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 MRPL32Q9BYC8 188 aaKnown RBP11.32□□□□□ -0.6
IRF3-210ENST00000595240 MBD2Q9UBB5 411 aa11.32□□□□□ -0.6
IRF3-210ENST00000595240 OR51M1Q9H341 326 aa11.31□□□□□ -0.6
IRF3-210ENST00000595240 FUT9Q9Y231 359 aa11.31□□□□□ -0.6
IRF3-210ENST00000595240 TIMM8BQ9Y5J9 83 aaPredicted RBP11.31□□□□□ -0.6
IRF3-210ENST00000595240 ALG5Q9Y673 324 aa11.31□□□□□ -0.6
IRF3-210ENST00000595240 PTTG1O95997 202 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 ERCC8Q13216 396 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 FXYD5Q96DB9 178 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 FAM19A4Q96LR4 140 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
IRF3-210ENST00000595240 TRAV12-3A0A0B4J271 114 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 CBY3A6NI87 242 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 J3KRW8 73 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 ICAM4Q14773 271 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 SMIM3Q9BZL3 60 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
IRF3-210ENST00000595240 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
IRF3-210ENST00000595240 KLLNB2CW77 178 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 IFNA5P01569 189 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 SLC25A5P05141 298 aaKnown RBP11.28□□□□□ -0.6
IRF3-210ENST00000595240 OR10J4P0C629 311 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 FAM122CQ6P4D5 195 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 SCGB1C1Q8TD33 95 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 ZNF503Q96F45 646 aa11.28□□□□□ -0.6
IRF3-210ENST00000595240 PYGO2Q9BRQ0 406 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms