RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ICAM4Q14773 271 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 Q9H3A6 140 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 A0A0J9YX75 114 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 H3BMM0 161 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 RPUSD4Q96CM3 377 aaKnown RBP16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 AAMDCQ9H7C9 122 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 PRAC2D3DTV9 90 aa16.61■□□□□ 0.25
SNRNP70-204ENST00000595231 HLA-DRB4P13762 266 aa16.61■□□□□ 0.25
SNRNP70-204ENST00000595231 TRPT1Q86TN4 253 aaKnown RBP16.61■□□□□ 0.25
SNRNP70-204ENST00000595231 IQCF2Q8IXL9 164 aa16.61■□□□□ 0.25
SNRNP70-204ENST00000595231 HLA-DRB4X5D2U9 266 aa16.61■□□□□ 0.25
SNRNP70-204ENST00000595231 STHQ8IWL8 128 aa16.6■□□□□ 0.25
SNRNP70-204ENST00000595231 MRPL53Q96EL3 112 aaKnown RBP16.6■□□□□ 0.25
SNRNP70-204ENST00000595231 PRELID1Q9Y255 219 aa16.6■□□□□ 0.25
SNRNP70-204ENST00000595231 LOC102724200A0A096LPH7 203 aaPredicted RBP16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 ZNF705DP0CH99 300 aaPredicted RBP16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 ZNF705BP0CI00 300 aaPredicted RBP16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 RPL35AP18077 110 aaKnown RBP16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 TRAV1-1A0A0B4J248 108 aa16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 EBLN2Q6P2I7 272 aa16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 TEX261Q6UWH6 196 aa16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 OR8A1Q8NGG7 326 aa16.59■□□□□ 0.25
SNRNP70-204ENST00000595231 A0A1B0GV50 99 aa16.58■□□□□ 0.24
SNRNP70-204ENST00000595231 PGPA6NDG6 321 aa16.58■□□□□ 0.24
SNRNP70-204ENST00000595231 ZNF705EA8MWA4 302 aaPredicted RBP16.58■□□□□ 0.24
SNRNP70-204ENST00000595231 OTORQ9NRC9 128 aa16.58■□□□□ 0.24
SNRNP70-204ENST00000595231 A0A1W2PRE2 83 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 CNN1P51911 297 aaKnown RBP16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 CCL20P78556 96 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 HAGHQ16775 308 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 SBSPONQ8IVN8 264 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 CLUHP3Q96NS8 147 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 YTHDF2Q9Y5A9 579 aaKnown RBP16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 A8MTW9 85 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 OR4B1Q8NGF8 309 aa16.56■□□□□ 0.24
SNRNP70-204ENST00000595231 GGTLC3B5MD39 225 aa16.55■□□□□ 0.24
SNRNP70-204ENST00000595231 IGKV3-20P01619 116 aa16.55■□□□□ 0.24
SNRNP70-204ENST00000595231 UBE2G2P60604 165 aa16.55■□□□□ 0.24
SNRNP70-204ENST00000595231 ZNF680Q8NEM1 530 aa16.55■□□□□ 0.24
SNRNP70-204ENST00000595231 B9D2Q9BPU9 175 aa16.55■□□□□ 0.24
SNRNP70-204ENST00000595231 KIR2DL5BA0A0G2JN68 375 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 KIR2DL5BA0A0G2JPC4 375 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 FAM74A7A6NL05 159 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 SUMO1P63165 101 aaKnown RBP16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 HIST1H1AQ02539 215 aaPredicted RBP16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 KIR2DL5AQ8N109 375 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 KIR2DL5BQ8NHK3 375 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 DNAH9Q9NYC9 4486 aa16.54■□□□□ 0.24
SNRNP70-204ENST00000595231 DUSP14O95147 198 aaKnown RBP16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 GIG44P09565 113 aaPredicted RBP16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 AMTNQ6UX39 209 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 RXFP4Q8TDU9 374 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 CSTL1Q9H114 145 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 NBEAL2Q6ZNJ1 2754 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 APOC4P55056 127 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 ARL6IP6Q8N6S5 226 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 ASCL2Q99929 193 aa16.53■□□□□ 0.24
SNRNP70-204ENST00000595231 IGKV2-40A0A087WW87 121 aaPredicted RBP16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 DIRC3C9JPN6 131 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 IGKV2D-40P01614 121 aaPredicted RBP16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 HBE1P02100 147 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 CSN1S1P47710 185 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 BLOC1S1P78537 153 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 OR10J6PQ8NGY7 276 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 LYPD6BQ8NI32 183 aa16.52■□□□□ 0.23
SNRNP70-204ENST00000595231 NPIPB6E9PJ23 425 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 TEX46H3BTG2 121 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 PAGE4O60829 102 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 ERCC8Q13216 396 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 CMTM2Q8TAZ6 248 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 ARL2-SNX15V9GYD0 113 aa16.51■□□□□ 0.23
SNRNP70-204ENST00000595231 COL7A1Q02388 2944 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 SLC25A5P05141 298 aaKnown RBP16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 GNG5P63218 68 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 MORN3Q6PF18 240 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 CCDC28AQ8IWP9 274 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 C5orf17Q8NAS9 161 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 VGLL1Q99990 258 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 NKX6-2Q9C056 277 aaPredicted RBP16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 AGPAT4-IT1Q9H0P7 198 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 SLC35B3Q9H1N7 401 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 C9orf47Q6ZRZ4 202 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 EPDR1Q9UM22 224 aa16.5■□□□□ 0.23
SNRNP70-204ENST00000595231 RBAKDNA6NC62 111 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 UBE2CO00762 179 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 IFNA7P01567 189 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 CT45A10P0DMU9 189 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 PPT1P50897 306 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 NUTF2P61970 127 aaKnown RBP16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 PMS2P11Q13670 270 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 GNG13Q9P2W3 67 aa16.49■□□□□ 0.23
SNRNP70-204ENST00000595231 CA1P00915 261 aaPredicted RBP16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 TCRAP04437 139 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 FXYD7P58549 80 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 CST9LP1Q5W188 147 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 LINC00477Q96M19 166 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 TM2D3Q9BRN9 247 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 RPH3ALQ9UNE2 315 aa16.48■□□□□ 0.23
SNRNP70-204ENST00000595231 ATP5G3P48201 142 aa16.47■□□□□ 0.23
SNRNP70-204ENST00000595231 GOLT1AQ6ZVE7 132 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms