RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 DEFB131BA0A096LNP1 70 aa15.92■□□□□ 0.14
GTF2F1-204ENST00000594965 ZNF705GA8MUZ8 300 aaPredicted RBP15.92■□□□□ 0.14
GTF2F1-204ENST00000594965 PTTG1O95997 202 aa15.92■□□□□ 0.14
GTF2F1-204ENST00000594965 SLC25A2Q9BXI2 301 aa15.92■□□□□ 0.14
GTF2F1-204ENST00000594965 YTHDF2Q9Y5A9 579 aaKnown RBP15.92■□□□□ 0.14
GTF2F1-204ENST00000594965 IGHV4-4A0A075B6R2 117 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 ZNF253O75346 499 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 NDUFB4O95168 129 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 PET100P0DJ07 73 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 PYYP10082 97 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 FAM167A-AS1Q96KT0 104 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 ATP5SQ99766 215 aa15.91■□□□□ 0.14
GTF2F1-204ENST00000594965 HIST1H1EP10412 219 aaKnown RBP15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 RPL12P30050 165 aaKnown RBP15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 KIR3DS1Q14943 382 aa15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 MIR17HGQ75NE6 70 aa15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 RPP25LQ8N5L8 163 aaKnown RBP15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 PARD6GQ9BYG4 376 aaPredicted RBP15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 PPP1R14DQ9NXH3 145 aa15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 VPS13DQ5THJ4 4388 aa15.9■□□□□ 0.14
GTF2F1-204ENST00000594965 CDKN1BP46527 198 aa15.89■□□□□ 0.13
GTF2F1-204ENST00000594965 NIPSNAP3BQ9BS92 247 aa15.89■□□□□ 0.13
GTF2F1-204ENST00000594965 SMIM3Q9BZL3 60 aa15.89■□□□□ 0.13
GTF2F1-204ENST00000594965 EPPK1P58107 5090 aaKnown RBP15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 PLAC8L1A1L4L8 177 aa15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 AZU1P20160 251 aa15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 OXA1LQ15070 435 aa15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 OR10J6PQ8NGY7 276 aa15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 WFDC1Q9HC57 220 aa15.88■□□□□ 0.13
GTF2F1-204ENST00000594965 TEX48A0A1B0GUV7 120 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 M0R3E3 92 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 CT45A10P0DMU9 189 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 FCN2Q15485 313 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 LINC01587Q99440 93 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 KCNIP2Q9NS61 270 aa15.87■□□□□ 0.13
GTF2F1-204ENST00000594965 NPIPB6E9PJ23 425 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 C17orf112F2Z3M2 114 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 TSPOP30536 169 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 PDE6HQ13956 83 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 TMEM256Q8N2U0 113 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 BLNKQ8WV28 456 aa15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 MRPL53Q96EL3 112 aaKnown RBP15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 MRPL32Q9BYC8 188 aaKnown RBP15.86■□□□□ 0.13
GTF2F1-204ENST00000594965 EXOC3-AS1Q8N2X6 119 aa15.85■□□□□ 0.13
GTF2F1-204ENST00000594965 FXYD5Q96DB9 178 aa15.85■□□□□ 0.13
GTF2F1-204ENST00000594965 FUT9Q9Y231 359 aa15.85■□□□□ 0.13
GTF2F1-204ENST00000594965 TIMM9Q9Y5J7 89 aa15.85■□□□□ 0.13
GTF2F1-204ENST00000594965 TAS2R60P59551 318 aa15.84■□□□□ 0.13
GTF2F1-204ENST00000594965 GFI1BQ5VTD9 330 aa15.84■□□□□ 0.13
GTF2F1-204ENST00000594965 ODF3Q96PU9 254 aa15.84■□□□□ 0.13
GTF2F1-204ENST00000594965 OR51M1Q9H341 326 aa15.84■□□□□ 0.13
GTF2F1-204ENST00000594965 IFNA5P01569 189 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 FFAR4Q5NUL3 377 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 SCGB1C1Q8TD33 95 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 ZNF503Q96F45 646 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 C20orf144Q9BQM9 153 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 MED28Q9H204 178 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 PRELID1Q9Y255 219 aa15.83■□□□□ 0.12
GTF2F1-204ENST00000594965 OR10J4P0C629 311 aa15.82■□□□□ 0.12
GTF2F1-204ENST00000594965 NBEAP1P0C6P0 100 aa15.82■□□□□ 0.12
GTF2F1-204ENST00000594965 ERCC8Q13216 396 aa15.82■□□□□ 0.12
GTF2F1-204ENST00000594965 PAXXQ9BUH6 204 aa15.82■□□□□ 0.12
GTF2F1-204ENST00000594965 DNAH6Q9C0G6 4158 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 LYRM9A8MSI8 78 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 H7BYZ3 331 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 DAD1P61803 113 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 ICAM4Q14773 271 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 NDUFAF3Q9BU61 184 aa15.81■□□□□ 0.12
GTF2F1-204ENST00000594965 J3KRW8 73 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 HTN1P15515 57 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 Q5BKY6 102 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 RNASE8Q8TDE3 154 aaKnown RBP15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 RNF141Q8WVD5 230 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 PHYHIPLQ96FC7 376 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 FAM19A4Q96LR4 140 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 AGPAT4-IT1Q9H0P7 198 aa15.8■□□□□ 0.12
GTF2F1-204ENST00000594965 HTN3P15516 51 aa15.79■□□□□ 0.12
GTF2F1-204ENST00000594965 LEPP41159 167 aa15.79■□□□□ 0.12
GTF2F1-204ENST00000594965 C16orf74Q96GX8 76 aa15.79■□□□□ 0.12
GTF2F1-204ENST00000594965 AAMDCQ9H7C9 122 aa15.79■□□□□ 0.12
GTF2F1-204ENST00000594965 OR7C2O60412 319 aa15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 EIF3GO75821 320 aaKnown RBP eCLIP15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 FAM122CQ6P4D5 195 aa15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 C9orf47Q6ZRZ4 202 aa15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 FAM210BQ96KR6 192 aa15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 LINC00477Q96M19 166 aa15.78■□□□□ 0.12
GTF2F1-204ENST00000594965 IGKV2-40A0A087WW87 121 aaPredicted RBP15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 TRAV12-3A0A0B4J271 114 aa15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 IGKV2D-40P01614 121 aaPredicted RBP15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 ZNF493Q6ZR52 646 aa15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 TMEM263Q8WUH6 116 aaKnown RBP15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 VGLL1Q99990 258 aa15.77■□□□□ 0.12
GTF2F1-204ENST00000594965 KLLNB2CW77 178 aa15.76■□□□□ 0.11
GTF2F1-204ENST00000594965 DEFB130BP0DP73 79 aa15.76■□□□□ 0.11
GTF2F1-204ENST00000594965 DEFB130AP0DP74 79 aa15.76■□□□□ 0.11
GTF2F1-204ENST00000594965 AQP10Q96PS8 301 aa15.76■□□□□ 0.11
GTF2F1-204ENST00000594965 SLC25A5P05141 298 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-204ENST00000594965 GIPP09681 153 aaPredicted RBP15.75■□□□□ 0.11
GTF2F1-204ENST00000594965 KHDC3LQ587J8 217 aa15.75■□□□□ 0.11
GTF2F1-204ENST00000594965 TMEM88Q6PEY1 159 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms