RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 M0R3E3 92 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 SLC25A5P05141 298 aaKnown RBP8.08□□□□□ -1.12
USE1-204ENST00000594399 DEFB131AP59861 70 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 HAGHQ16775 308 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 CST9LP1Q5W188 147 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 C5orf17Q8NAS9 161 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 CMTM2Q8TAZ6 248 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 FAM110AQ9BQ89 295 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 DNAH3Q8TD57 4116 aa8.08□□□□□ -1.12
USE1-204ENST00000594399 TGP01266 2768 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 LOC102723971A0A1B0GUV8 181 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 C11orf94C9JXX5 98 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 CD7P09564 240 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 CSN1S1P47710 185 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 ATP5G3P48201 142 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
USE1-204ENST00000594399 KPRPQ5T749 579 aaPredicted RBP8.07□□□□□ -1.12
USE1-204ENST00000594399 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 RPUSD4Q96CM3 377 aaKnown RBP8.07□□□□□ -1.12
USE1-204ENST00000594399 FAM210AQ96ND0 272 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 PRR25Q96S07 402 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 TCEAL7Q9BRU2 100 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 VAX2Q9UIW0 290 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 RPH3ALQ9UNE2 315 aa8.07□□□□□ -1.12
USE1-204ENST00000594399 ZNF705FA8MVS1 300 aaPredicted RBP8.06□□□□□ -1.12
USE1-204ENST00000594399 MEF2BQ02080 365 aaPredicted RBP8.06□□□□□ -1.12
USE1-204ENST00000594399 TOR2AQ5JU69 321 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 ARL6IP6Q8N6S5 226 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 TXNDC17Q9BRA2 123 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 C19orf73Q9NVV2 129 aa8.06□□□□□ -1.12
USE1-204ENST00000594399 SERTM2A0A1B0GWG4 89 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 RBFOX3A6NFN3 312 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 F6UZH7 168 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 GNG5P63218 68 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 ZNF124Q15973 351 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 ZNF506Q5JVG8 444 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 EBLN2Q6P2I7 272 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 APRG1Q8IVJ8 170 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 OR8A1Q8NGG7 326 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 ATG101Q9BSB4 218 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
USE1-204ENST00000594399 WFDC10AQ9H1F0 79 aa8.05□□□□□ -1.12
USE1-204ENST00000594399 SAV1Q9H4B6 383 aaPredicted RBP8.05□□□□□ -1.12
USE1-204ENST00000594399 IGKV2-40A0A087WW87 121 aaPredicted RBP8.04□□□□□ -1.12
USE1-204ENST00000594399 A0A0J9YX75 114 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 RBAKDNA6NC62 111 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 KNCNA6PVL3 124 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 PRAC2D3DTV9 90 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 F6UB75 175 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 K7EQM0 130 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 PEX7O00628 323 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 PDE6DO43924 150 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 IGKV2D-40P01614 121 aaPredicted RBP8.04□□□□□ -1.12
USE1-204ENST00000594399 TCRAP04437 139 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 PRB4P10163 310 aaPredicted RBP8.04□□□□□ -1.12
USE1-204ENST00000594399 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 DEFB1P60022 68 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 HIST1H1AQ02539 215 aaPredicted RBP8.04□□□□□ -1.12
USE1-204ENST00000594399 ACTL10Q5JWF8 245 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 CYB561D1Q8N8Q1 229 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 OR10J6PQ8NGY7 276 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 HIST1H2BAQ96A08 127 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 RARRES2Q99969 163 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
USE1-204ENST00000594399 SCO2A0A1W2PP80 73 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
USE1-204ENST00000594399 AKR1C3P42330 323 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 GDF5OSQ5U4N7 250 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 STHQ8IWL8 128 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 Q8N1Y9 231 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 DEFB125Q8N687 156 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 C11orf52Q96A22 123 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 SRD5A3Q9H8P0 318 aa8.03□□□□□ -1.12
USE1-204ENST00000594399 RAB19A4D1S5 217 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 NPIPB6E9PJ23 425 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 H3BMM0 161 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 NDUFS6O75380 124 aaKnown RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 ZNF705DP0CH99 300 aaPredicted RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 ZNF705BP0CI00 300 aaPredicted RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 CNN1P51911 297 aaKnown RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 ERCC8Q13216 396 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 TMEM75Q8N9X5 138 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 CITED4Q96RK1 184 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 MED9Q9NWA0 146 aa8.02□□□□□ -1.13
USE1-204ENST00000594399 AURKAIP1Q9NWT8 199 aaPredicted RBP8.02□□□□□ -1.13
USE1-204ENST00000594399 TRAV8-1A0A0A6YYK1 113 aa8.01□□□□□ -1.13
USE1-204ENST00000594399 LINC00862A6NCI5 91 aa8.01□□□□□ -1.13
USE1-204ENST00000594399 FBLL1A6NHQ2 334 aaKnown RBP8.01□□□□□ -1.13
USE1-204ENST00000594399 A8MTW9 85 aa8.01□□□□□ -1.13
USE1-204ENST00000594399 TMEM250H0YL14 139 aa8.01□□□□□ -1.13
USE1-204ENST00000594399 PEA15Q15121 130 aa8.01□□□□□ -1.13
USE1-204ENST00000594399 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms