RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ATP6V0BQ99437 205 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 MGST2Q99735 147 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 LSM4Q9Y4Z0 139 aaKnown RBP14.98□□□□□ -0.01
LSM4-203ENST00000593829 ZNF705FA8MVS1 300 aaPredicted RBP14.98□□□□□ -0.01
LSM4-203ENST00000593829 WIPF1O43516 503 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 MT-CO2P00403 227 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 ZNF705DP0CH99 300 aaPredicted RBP14.98□□□□□ -0.01
LSM4-203ENST00000593829 ZNF705BP0CI00 300 aaPredicted RBP14.98□□□□□ -0.01
LSM4-203ENST00000593829 INSL3P51460 131 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 LINC00310P59036 64 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 PVRIGQ6DKI7 326 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 ATG101Q9BSB4 218 aa14.98□□□□□ -0.01
LSM4-203ENST00000593829 MEGF8Q7Z7M0 2845 aa14.97□□□□□ -0.01
LSM4-203ENST00000593829 SCO2A0A1W2PP80 73 aa14.97□□□□□ -0.01
LSM4-203ENST00000593829 CORTO00230 105 aa14.97□□□□□ -0.01
LSM4-203ENST00000593829 Q6ZWC4 215 aa14.97□□□□□ -0.01
LSM4-203ENST00000593829 SAP30O75446 220 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 CRISP2P16562 243 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 ZNF90Q03938 601 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 TMEM183BQ1AE95 376 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 COX19Q49B96 90 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 SLC24A4Q8NFF2 622 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 OR9G4Q8NGQ1 327 aa14.96□□□□□ -0.01
LSM4-203ENST00000593829 OR2T8A6NH00 312 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 OR10J4P0C629 311 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 GCHFRP30047 84 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 EGFEM1PQ0D2K5 195 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 C2orf83Q53S99 150 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 Q56UQ5 140 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 GPHB5Q86YW7 130 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 MRPL18Q9H0U6 180 aaKnown RBP14.96□□□□□ -0.02
LSM4-203ENST00000593829 NPVFQ9HCQ7 196 aa14.96□□□□□ -0.02
LSM4-203ENST00000593829 AURKAIP1Q9NWT8 199 aaPredicted RBP14.96□□□□□ -0.02
LSM4-203ENST00000593829 PGPEP1LA6NFU8 196 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 FNDC10F2Z333 226 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 MFAP4P55083 255 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 TXN2Q99757 166 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 GNB1LQ9BYB4 327 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 PEMTQ9UBM1 199 aa14.95□□□□□ -0.02
LSM4-203ENST00000593829 RHOBP62745 196 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 RPL19P84098 196 aaKnown RBP14.94□□□□□ -0.02
LSM4-203ENST00000593829 FAM106AQ4KMX7 169 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 UHRF2Q96PU4 802 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 YTHDF2Q9Y5A9 579 aaKnown RBP14.94□□□□□ -0.02
LSM4-203ENST00000593829 F8W735 103 aaPredicted RBP14.94□□□□□ -0.02
LSM4-203ENST00000593829 DLEU1O43261 78 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 IGHV3-48P01763 117 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 MT-ND6P03923 174 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 NPY1RP25929 384 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 FCGR2BP31994 310 aaPredicted RBP14.94□□□□□ -0.02
LSM4-203ENST00000593829 RPL29P47914 159 aaKnown RBP14.94□□□□□ -0.02
LSM4-203ENST00000593829 MIC13Q5XKP0 118 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 TOMM20LQ6UXN7 152 aa14.94□□□□□ -0.02
LSM4-203ENST00000593829 K7EN84 100 aa14.93□□□□□ -0.02
LSM4-203ENST00000593829 LGALS9O00182 355 aa14.93□□□□□ -0.02
LSM4-203ENST00000593829 SERF1AO75920 110 aa14.93□□□□□ -0.02
LSM4-203ENST00000593829 ZNF25P17030 456 aaPredicted RBP14.93□□□□□ -0.02
LSM4-203ENST00000593829 KRTAP10-11P60412 298 aa14.93□□□□□ -0.02
LSM4-203ENST00000593829 GRIFINA4D1Z8 144 aa14.92□□□□□ -0.02
LSM4-203ENST00000593829 CBLN1P23435 193 aa14.92□□□□□ -0.02
LSM4-203ENST00000593829 ATP5IP56385 69 aaPredicted RBP14.92□□□□□ -0.02
LSM4-203ENST00000593829 ZNF705AQ6ZN79 300 aaPredicted RBP14.92□□□□□ -0.02
LSM4-203ENST00000593829 LINC00614P0C842 121 aa14.92□□□□□ -0.02
LSM4-203ENST00000593829 CHRDL1Q9BU40 450 aa14.92□□□□□ -0.02
LSM4-203ENST00000593829 FNDC4Q9H6D8 234 aaPredicted RBP14.92□□□□□ -0.02
LSM4-203ENST00000593829 PRB2P02812 416 aaPredicted RBP14.91□□□□□ -0.02
LSM4-203ENST00000593829 CSN3P07498 182 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 CTSGP08311 255 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 OR10J3Q5JRS4 329 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 WDR73Q6P4I2 378 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 TMEM208Q9BTX3 173 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 VAMP8Q9BV40 100 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 V9GYV3 84 aa14.91□□□□□ -0.02
LSM4-203ENST00000593829 IGHV3-35A0A0C4DH35 117 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 GNG7O60262 68 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 G0S2P27469 103 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 RAB31Q13636 194 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 TEPPQ6URK8 271 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 OR4B1Q8NGF8 309 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 SIGLEC8Q9NYZ4 499 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 PRR20EP86478 221 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 PRR20CP86479 221 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 PRR20DP86480 221 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 PRR20BP86481 221 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 PRR20AP86496 221 aa14.9□□□□□ -0.02
LSM4-203ENST00000593829 RELQ04864 619 aaPredicted RBP14.9□□□□□ -0.02
LSM4-203ENST00000593829 MLANAQ16655 118 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 ETFRF1Q6IPR1 90 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 BAGE3Q86Y29 109 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 BAGE2Q86Y30 109 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 OSTCQ9NRP0 149 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 TMEM167BQ9NRX6 74 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 GOLT1BQ9Y3E0 138 aa14.89□□□□□ -0.03
LSM4-203ENST00000593829 NDUFA4O00483 81 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 UNQ9165/PRO28630Q6UXU0 137 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 RNF2Q99496 336 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 C2orf70A6NJV1 201 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 SNURFLB1AK76 121 aa14.88□□□□□ -0.03
LSM4-203ENST00000593829 IGLV1-51P01701 117 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms