RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 A0A096LNT2 108 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 A0A1W2PS18 150 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 A6NDX4 124 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 CHEK1O14757 476 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 SCGB1D1O95968 90 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 KRTAP10-9P60411 292 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 C8orf49Q96NF6 230 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 PRO1933Q9H354 126 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 IGKV2-40A0A087WW87 121 aaPredicted RBP15.21■□□□□ 0.03
CLIP3-206ENST00000593074 IGKV2D-40P01614 121 aaPredicted RBP15.21■□□□□ 0.03
CLIP3-206ENST00000593074 RELQ04864 619 aaPredicted RBP15.21■□□□□ 0.03
CLIP3-206ENST00000593074 SIGLECL1Q8N7X8 197 aa15.21■□□□□ 0.03
CLIP3-206ENST00000593074 LRRK2Q5S007 2527 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 HAX1O00165 279 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 ZNF324O75467 553 aaPredicted RBP15.2■□□□□ 0.02
CLIP3-206ENST00000593074 CT45A10P0DMU9 189 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 C1orf194Q5T5A4 169 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 CELSR1Q9NYQ6 3014 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 DDTP30046 118 aa15.2■□□□□ 0.02
CLIP3-206ENST00000593074 BEX4Q9NWD9 120 aaPredicted RBP15.2■□□□□ 0.02
CLIP3-206ENST00000593074 ZFHX3Q15911 3703 aa15.19■□□□□ 0.02
CLIP3-206ENST00000593074 M0QZK8 103 aa15.19■□□□□ 0.02
CLIP3-206ENST00000593074 BRI3O95415 125 aa15.19■□□□□ 0.02
CLIP3-206ENST00000593074 IGHG2P01859 326 aa15.19■□□□□ 0.02
CLIP3-206ENST00000593074 LINC00527Q9UJ94 153 aa15.19■□□□□ 0.02
CLIP3-206ENST00000593074 J3QLI3 93 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 AMTP48728 403 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 LOXL1Q08397 574 aaPredicted RBP15.18■□□□□ 0.02
CLIP3-206ENST00000593074 SAPCD1Q5SSQ6 148 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 TGFAP01135 160 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 TRGV3P03979 118 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 CD33P20138 364 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 Q6AWC8 147 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 PRR25Q96S07 402 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 METTL26Q96S19 204 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 U3KQE9 123 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 CELSR2Q9HCU4 2923 aa15.18■□□□□ 0.02
CLIP3-206ENST00000593074 HLA-DMBP28068 263 aa15.17■□□□□ 0.02
CLIP3-206ENST00000593074 DEFB113Q30KQ7 82 aa15.17■□□□□ 0.02
CLIP3-206ENST00000593074 IGFL4Q6B9Z1 124 aa15.17■□□□□ 0.02
CLIP3-206ENST00000593074 SLC50A1Q9BRV3 221 aa15.17■□□□□ 0.02
CLIP3-206ENST00000593074 A0A1B0GUT8 65 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 RNF223E7ERA6 249 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 H3BUA1 57 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 PPIFP30405 207 aaKnown RBP15.16■□□□□ 0.02
CLIP3-206ENST00000593074 FAM162BQ5T6X4 162 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 MAPK1IP1LQ8NDC0 245 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 PMCHP20382 165 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 DEFA6Q01524 100 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 LCN12Q6JVE5 192 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 LRRC75A-AS1Q8N1F1 130 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 VGLL1Q99990 258 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 NRN1Q9NPD7 142 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 RNF114Q9Y508 228 aa15.16■□□□□ 0.02
CLIP3-206ENST00000593074 SH2D1AO60880 128 aa15.15■□□□□ 0.02
CLIP3-206ENST00000593074 GATD1Q8NB37 220 aa15.15■□□□□ 0.02
CLIP3-206ENST00000593074 CRYBG3Q68DQ2 2970 aa15.15■□□□□ 0.02
CLIP3-206ENST00000593074 ZNF705FA8MVS1 300 aaPredicted RBP15.15■□□□□ 0.02
CLIP3-206ENST00000593074 ARMS2P0C7Q2 107 aa15.15■□□□□ 0.02
CLIP3-206ENST00000593074 LOC102724200A0A096LPH7 203 aaPredicted RBP15.14■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV3-66A0A0C4DH42 116 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 A0A1B0GW15 77 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 PRR31Q5SQ13 230 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 TEX43Q6ZNM6 134 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 NIT1Q86X76 327 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 Q8TAT8 98 aa15.14■□□□□ 0.01
CLIP3-206ENST00000593074 KIR2DL5BA0A0G2JN68 375 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 KIR2DL5BA0A0G2JPC4 375 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 RBAKDNA6NC62 111 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 BLCAPP62952 87 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 RIGQ13278 110 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 KIR2DL5AQ8N109 375 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLIP3-206ENST00000593074 ARL3P36405 182 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 FAM209BQ5JX69 171 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 C14orf144Q96I85 54 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 USMG5Q96IX5 58 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 NDFIP1Q9BT67 221 aa15.13■□□□□ 0.01
CLIP3-206ENST00000593074 ZNF207O43670 478 aaKnown RBP15.12■□□□□ 0.01
CLIP3-206ENST00000593074 ZNF705DP0CH99 300 aaPredicted RBP15.12■□□□□ 0.01
CLIP3-206ENST00000593074 ZNF705BP0CI00 300 aaPredicted RBP15.12■□□□□ 0.01
CLIP3-206ENST00000593074 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
CLIP3-206ENST00000593074 FAM19A2Q8N3H0 131 aa15.12■□□□□ 0.01
CLIP3-206ENST00000593074 TMEM189A5PLL7 270 aa15.12■□□□□ 0.01
CLIP3-206ENST00000593074 Q5PR19 223 aa15.12■□□□□ 0.01
CLIP3-206ENST00000593074 RNF182Q8N6D2 247 aa15.12■□□□□ 0.01
CLIP3-206ENST00000593074 MRPL53Q96EL3 112 aaKnown RBP15.12■□□□□ 0.01
CLIP3-206ENST00000593074 FBN2P35556 2912 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV3OR16-13A0A075B7E8 117 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV3-74A0A0B4J1X5 117 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 PRAC2D3DTV9 90 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 HSBP1O75506 76 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV4-31P0DP07 118 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 KRTDAPP60985 99 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 REC114Q7Z4M0 266 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 Q8N976 141 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 URB1-AS1Q96HZ7 61 aa15.11■□□□□ 0.01
CLIP3-206ENST00000593074 ANKRD17O75179 2603 aaKnown RBP15.11■□□□□ 0.01
CLIP3-206ENST00000593074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms