RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF705BP0CI00 300 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-221ENST00000593026 STAG3L2P0CL84 134 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 STAG3L3P0CL85 134 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 ARL14EPLP0DKL9 152 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 C4BPBP20851 252 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
DDX39A-221ENST00000593026 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-221ENST00000593026 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 OR8A1Q8NGG7 326 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 STOML3Q8TAV4 291 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
DDX39A-221ENST00000593026 PHYHIPLQ96FC7 376 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 TP53TG1Q9Y2A0 90 aa10.94□□□□□ -0.66
DDX39A-221ENST00000593026 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 SPRY2O43597 315 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-221ENST00000593026 ICAM4Q14773 271 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 C9orf62Q8N4C0 152 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 RNF183Q96D59 192 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 OVOL2Q9BRP0 275 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
DDX39A-221ENST00000593026 CTXND1A0A1B0GTU2 59 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 A8MTW9 85 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 M0R3E3 92 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 CXorf1O96002 111 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-221ENST00000593026 GCHFRP30047 84 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 RANP62826 216 aaKnown RBP10.92□□□□□ -0.66
DDX39A-221ENST00000593026 ZNF726P1Q15940 193 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 SSX7Q7RTT5 188 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
DDX39A-221ENST00000593026 UMAD1C9J7I0 102 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 FXYD7P58549 80 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 SLC51BQ86UW2 128 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 IQCF2Q8IXL9 164 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 TMED6Q8WW62 240 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 Q9H3A6 140 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
DDX39A-221ENST00000593026 EIF5AL1Q6IS14 154 aaKnown RBP10.9□□□□□ -0.66
DDX39A-221ENST00000593026 AMTNQ6UX39 209 aa10.9□□□□□ -0.66
DDX39A-221ENST00000593026 TMEM167BQ9NRX6 74 aa10.9□□□□□ -0.66
DDX39A-221ENST00000593026 NBEAL2Q6ZNJ1 2754 aa10.9□□□□□ -0.66
DDX39A-221ENST00000593026 MAP1LC3B2A6NCE7 125 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 CSN1S1P47710 185 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 FHITP49789 147 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 NKX2-5P52952 324 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-221ENST00000593026 FAM74A1Q5RGS3 127 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 FAM213BQ8TBF2 198 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 MAP1LC3BQ9GZQ8 125 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 OTORQ9NRC9 128 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 TENM3Q9P273 2699 aa10.89□□□□□ -0.67
DDX39A-221ENST00000593026 PGPA6NDG6 321 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 NPIPB6E9PJ23 425 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 BOLA2-SMG1P6H3BVE0 249 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 M0R2Z0 102 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 AMBPP02760 352 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 FGF8P55075 233 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-221ENST00000593026 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 DPPA3Q6W0C5 159 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 CSNK1G2-AS1Q8NCQ2 148 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 SUN5Q8TC36 379 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 RARRES2Q99969 163 aa10.88□□□□□ -0.67
DDX39A-221ENST00000593026 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-221ENST00000593026 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-221ENST00000593026 CMTM2Q8TAZ6 248 aa10.87□□□□□ -0.67
DDX39A-221ENST00000593026 RXFP4Q8TDU9 374 aa10.87□□□□□ -0.67
DDX39A-221ENST00000593026 ERCC8Q13216 396 aa10.86□□□□□ -0.67
DDX39A-221ENST00000593026 TMPRSS5Q9H3S3 457 aa10.86□□□□□ -0.67
DDX39A-221ENST00000593026 RPH3ALQ9UNE2 315 aa10.86□□□□□ -0.67
DDX39A-221ENST00000593026 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
DDX39A-221ENST00000593026 INSP01308 110 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 CT45A10P0DMU9 189 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 TSPOP30536 169 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 CDKN1BP46527 198 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 RAB5CP51148 216 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 SFT2D1Q8WV19 159 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 MBD3L1Q8WWY6 194 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 IGF2BP2-AS1Q96M15 143 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 LINC00477Q96M19 166 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 WWC2-AS2Q96NR7 200 aa10.85□□□□□ -0.67
DDX39A-221ENST00000593026 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 IGHV3OR16-12A0A075B7B8 117 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 ZNF705EA8MWA4 302 aaPredicted RBP10.84□□□□□ -0.67
DDX39A-221ENST00000593026 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 CRXO43186 299 aaPredicted RBP10.84□□□□□ -0.67
DDX39A-221ENST00000593026 SLC25A5P05141 298 aaKnown RBP10.84□□□□□ -0.67
DDX39A-221ENST00000593026 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 LEPP41159 167 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 SULT1A2P50226 295 aa10.84□□□□□ -0.67
DDX39A-221ENST00000593026 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms