RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 IGKV3-15P01624 115 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 HERVK_113P63121 156 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 MZT1Q08AG7 82 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 HES3Q5TGS1 186 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 ARL17AQ8IVW1 177 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 CFHR4Q92496 578 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 CALYQ9NYX4 217 aa9.74□□□□□ -0.85
SMARCA4-217ENST00000591595 CNOT1A5YKK6 2376 aaKnown RBP9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 H3BVH4 76 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 ORM2P19652 201 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 HSPE1P61604 102 aaKnown RBP9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 TAL2Q16559 108 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 ASCL2Q99929 193 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 GNG5P63218 68 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 MOB3BQ86TA1 216 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 PIFOQ8TCI5 191 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 IFI27L2Q9H2X8 130 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 RAXQ9Y2V3 346 aa9.73□□□□□ -0.85
SMARCA4-217ENST00000591595 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 CACNA1GO43497 2377 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 UTF1Q5T230 341 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 NABP2Q9BQ15 211 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 SLC25A10Q9UBX3 287 aaPredicted RBP9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 INTS1Q8N201 2190 aaKnown RBP9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 IGHG3P01860 377 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 SRSF2Q01130 221 aaKnown RBP9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 LOXL1Q08397 574 aaPredicted RBP9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 BAALCQ8WXS3 180 aa9.72□□□□□ -0.85
SMARCA4-217ENST00000591595 SAA2P0DJI9 122 aaPredicted RBP9.71□□□□□ -0.85
SMARCA4-217ENST00000591595 PSMG4Q5JS54 123 aa9.71□□□□□ -0.85
SMARCA4-217ENST00000591595 RND1Q92730 232 aa9.71□□□□□ -0.85
SMARCA4-217ENST00000591595 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.85
SMARCA4-217ENST00000591595 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 SRRM5B3KS81 715 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 M0R1B8 84 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 HOXA3O43365 443 aaPredicted RBP9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 TPRP12270 2363 aaKnown RBP9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 PLCE1Q9P212 2302 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 IGHV1-18A0A0C4DH31 117 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 PRSS46E5RG02 174 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 TMEM219Q86XT9 240 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 GATD1Q8NB37 220 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 EPDR1Q9UM22 224 aa9.71□□□□□ -0.86
SMARCA4-217ENST00000591595 GVINP1Q7Z2Y8 2422 aa9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 MBD3L4A6NDZ8 208 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 MBD3L3A6NE82 208 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 MBD3L5A6NJ08 208 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 LOXL3P58215 753 aa9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 KLF17Q5JT82 389 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 ZNF883P0CG24 379 aa9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 C1orf229Q6ZS94 237 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 OR4C13Q8NGP0 309 aa9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 ITLN1Q8WWA0 313 aa9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 RPP21Q9H633 154 aaKnown RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
SMARCA4-217ENST00000591595 TRGV8A0A0C4DH27 118 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 SCGB1C2P0DMR2 95 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 DUX4L9Q6RFH8 374 aaPredicted RBP9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 FDCSPQ8NFU4 85 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 PCNX2A6NKB5 2137 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 TECTAO75443 2155 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 CD59P13987 128 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 FXYD7P58549 80 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 MLANAQ16655 118 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 ZNF503Q96F45 646 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 C1orf159Q96HA4 380 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 PTPRBP23467 1997 aa9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
SMARCA4-217ENST00000591595 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 J3QLI3 93 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 HBDP02042 147 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 TNFAIP6P98066 277 aaPredicted RBP9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 PRNDQ9UKY0 176 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 HHLA3Q9XRX5 114 aa9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
SMARCA4-217ENST00000591595 LOC389332A0A1B0GUA5 103 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 TM4SF5O14894 197 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 UBE2L3P68036 154 aaKnown RBP9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 FOXC1Q12948 553 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 C7orf69Q9H7B7 122 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 TMEM14BQ9NUH8 114 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 ZNRD1Q9P1U0 126 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms