RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PQLC2Q6ZP29 291 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 CYP2G1PQ6ZSU1 146 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 TCF24Q7RTU0 167 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 STHQ8IWL8 128 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 OR51G1Q8NGK1 321 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 NPIPB3Q92617 1050 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 GPR82Q96P67 336 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 HRH4Q9H3N8 390 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 DNAJC4Q9NNZ3 241 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 PXMP4Q9Y6I8 212 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 ARL2-SNX15V9GYD0 113 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 RAB19A4D1S5 217 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 COX7A2P2O60397 106 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 HYPMO75409 117 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 CXorf1O96002 111 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 TOMM40O96008 361 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 PLP1P60201 277 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 KHDC3LQ587J8 217 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-226ENST00000591534 ZNF600Q6ZNG1 722 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 GBGT1Q8N5D6 347 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 OR10G4Q8NGN3 311 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 OR10G9Q8NGN4 311 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 OR10G7Q8NGN6 311 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 TCEAL7Q9BRU2 100 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 TMEM167BQ9NRX6 74 aa6.9□□□□□ -1.3
BRCA1-226ENST00000591534 IGHV3-49A0A0A0MS15 119 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 IGLL5B9A064 214 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV3-48P01763 117 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 MIFP14174 115 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 NPPCP23582 126 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 CDC34P49427 236 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-226ENST00000591534 ARL16Q0P5N6 197 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 PEA15Q15121 130 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 C10orf113Q5VZT2 155 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 FAM90A2PQ658T7 463 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 TMEM182Q6ZP80 229 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-226ENST00000591534 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 GRAMD2BQ96HH9 432 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 MS4A6AQ9H2W1 248 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 WFDC1Q9HC57 220 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 CLEC5AQ9NY25 188 aa6.89□□□□□ -1.31
BRCA1-226ENST00000591534 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 TRAV10A0A0B4J240 114 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 LINC00862A6NCI5 91 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 LINC00869P0C866 280 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 HOXA5P20719 270 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 DEFB131AP59861 70 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 IFITM2Q01629 132 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 FAM74A1Q5RGS3 127 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 C1orf194Q5T5A4 169 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 TOMM20LQ6UXN7 152 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 EIF4E3Q8N5X7 224 aaKnown RBP6.88□□□□□ -1.31
BRCA1-226ENST00000591534 SFT2D1Q8WV19 159 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 TMEM170AQ8WVE7 144 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 METTL26Q96S19 204 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 MGST2Q99735 147 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 RSG1Q9BU20 258 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 RABAC1Q9UI14 185 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 HIGD1AQ9Y241 93 aa6.88□□□□□ -1.31
BRCA1-226ENST00000591534 FRAS1Q86XX4 4008 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV3OR16-13A0A075B7E8 117 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 IGHV3-74A0A0B4J1X5 117 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 NMBP08949 121 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 S100A1P23297 94 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
BRCA1-226ENST00000591534 GUK1Q16774 197 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 LEMD1Q68G75 181 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
BRCA1-226ENST00000591534 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 FNDC4Q9H6D8 234 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-226ENST00000591534 FUT9Q9Y231 359 aa6.87□□□□□ -1.31
BRCA1-226ENST00000591534 PUS1Q9Y606 427 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-226ENST00000591534 LOC102723971A0A1B0GUV8 181 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 HELTA6NFD8 242 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 F6UZH7 168 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 DEFB4AO15263 64 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 OR5G3P0C626 314 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
BRCA1-226ENST00000591534 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 FAM78BQ5VT40 261 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 BPIFA4PQ86YQ2 179 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 RNF125Q96EQ8 232 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 C1QTNF4Q9BXJ3 329 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 MAP1LC3BQ9GZQ8 125 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 SH3BGRL3Q9H299 93 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
BRCA1-226ENST00000591534 APLNQ9ULZ1 77 aa6.86□□□□□ -1.31
BRCA1-226ENST00000591534 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
BRCA1-226ENST00000591534 PDE6DO43924 150 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms