RNA–Protein interactions for RNA: ENST00000591054.5

MRPL4-209, Transcript of mitochondrial ribosomal protein L4, humanhuman

TSL 3

Gene MRPL4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-209ENST00000591054 RPUSD4Q96CM3 377 aaKnown RBP16.41■□□□□ 0.22
MRPL4-209ENST00000591054 BOLA2-SMG1P6H3BVE0 249 aa16.4■□□□□ 0.22
MRPL4-209ENST00000591054 FHITP49789 147 aa16.4■□□□□ 0.22
MRPL4-209ENST00000591054 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
MRPL4-209ENST00000591054 UBE2CO00762 179 aa16.39■□□□□ 0.21
MRPL4-209ENST00000591054 DUSP14O95147 198 aaKnown RBP16.39■□□□□ 0.21
MRPL4-209ENST00000591054 GDF5OSQ5U4N7 250 aa16.39■□□□□ 0.21
MRPL4-209ENST00000591054 MORN3Q6PF18 240 aaPredicted RBP16.39■□□□□ 0.21
MRPL4-209ENST00000591054 Q9H3A6 140 aa16.39■□□□□ 0.21
MRPL4-209ENST00000591054 OTORQ9NRC9 128 aa16.39■□□□□ 0.21
MRPL4-209ENST00000591054 BOLA1Q9Y3E2 137 aa16.39■□□□□ 0.21
MRPL4-209ENST00000591054 A8MTW9 85 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 RPL35AP18077 110 aaKnown RBP16.38■□□□□ 0.21
MRPL4-209ENST00000591054 RANP62826 216 aaKnown RBP16.38■□□□□ 0.21
MRPL4-209ENST00000591054 ICAM4Q14773 271 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 HAGHQ16775 308 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 FAM74A1Q5RGS3 127 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 EXOC3-AS1Q8N2X6 119 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 OR8A1Q8NGG7 326 aa16.38■□□□□ 0.21
MRPL4-209ENST00000591054 F6UB75 175 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 H2AFB1P0C5Y9 115 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 DEFB1P60022 68 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 NUTF2P61970 127 aaKnown RBP16.37■□□□□ 0.21
MRPL4-209ENST00000591054 SBSPONQ8IVN8 264 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 ARL6IP6Q8N6S5 226 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 CSTL1Q9H114 145 aa16.37■□□□□ 0.21
MRPL4-209ENST00000591054 ZNF705FA8MVS1 300 aaPredicted RBP16.36■□□□□ 0.21
MRPL4-209ENST00000591054 M0R3E3 92 aa16.36■□□□□ 0.21
MRPL4-209ENST00000591054 FGF8P55075 233 aaPredicted RBP16.36■□□□□ 0.21
MRPL4-209ENST00000591054 IQCF2Q8IXL9 164 aa16.36■□□□□ 0.21
MRPL4-209ENST00000591054 RXFP4Q8TDU9 374 aa16.36■□□□□ 0.21
MRPL4-209ENST00000591054 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
MRPL4-209ENST00000591054 A0A1W2PRE2 83 aa16.35■□□□□ 0.21
MRPL4-209ENST00000591054 NHLRC4P0CG21 123 aaPredicted RBP16.35■□□□□ 0.21
MRPL4-209ENST00000591054 CSN1S1P47710 185 aa16.35■□□□□ 0.21
MRPL4-209ENST00000591054 CNN1P51911 297 aaKnown RBP16.35■□□□□ 0.21
MRPL4-209ENST00000591054 OR10J6PQ8NGY7 276 aa16.35■□□□□ 0.21
MRPL4-209ENST00000591054 ARL2-SNX15V9GYD0 113 aa16.35■□□□□ 0.21
MRPL4-209ENST00000591054 TRAV1-1A0A0B4J248 108 aa16.34■□□□□ 0.21
MRPL4-209ENST00000591054 TEX46H3BTG2 121 aa16.34■□□□□ 0.21
MRPL4-209ENST00000591054 HIST1H1AQ02539 215 aaPredicted RBP16.34■□□□□ 0.21
MRPL4-209ENST00000591054 ALKAL2Q6UX46 152 aa16.34■□□□□ 0.21
MRPL4-209ENST00000591054 OR4B1Q8NGF8 309 aa16.34■□□□□ 0.21
MRPL4-209ENST00000591054 TM2D3Q9BRN9 247 aa16.34■□□□□ 0.21
MRPL4-209ENST00000591054 DNAH9Q9NYC9 4486 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 PRAC2D3DTV9 90 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 PPT1P50897 306 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 Q6ZWC4 215 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 CMTM2Q8TAZ6 248 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 SPATA25Q9BR10 227 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 NKX6-2Q9C056 277 aaPredicted RBP16.33■□□□□ 0.2
MRPL4-209ENST00000591054 TMPRSS5Q9H3S3 457 aa16.33■□□□□ 0.2
MRPL4-209ENST00000591054 PGPA6NDG6 321 aa16.32■□□□□ 0.2
MRPL4-209ENST00000591054 NPIPB6E9PJ23 425 aa16.32■□□□□ 0.2
MRPL4-209ENST00000591054 HBE1P02100 147 aa16.32■□□□□ 0.2
MRPL4-209ENST00000591054 ASCL2Q99929 193 aa16.32■□□□□ 0.2
MRPL4-209ENST00000591054 RBAKDNA6NC62 111 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 ZNF705EA8MWA4 302 aaPredicted RBP16.31■□□□□ 0.2
MRPL4-209ENST00000591054 CA1P00915 261 aaPredicted RBP16.31■□□□□ 0.2
MRPL4-209ENST00000591054 AMTNQ6UX39 209 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 C5orf17Q8NAS9 161 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 ODF3Q96PU9 254 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 ZMAT4Q9H898 229 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 TP53TG1Q9Y2A0 90 aa16.31■□□□□ 0.2
MRPL4-209ENST00000591054 IGKV3-20P01619 116 aa16.3■□□□□ 0.2
MRPL4-209ENST00000591054 AMBPP02760 352 aa16.3■□□□□ 0.2
MRPL4-209ENST00000591054 SLC25A5P05141 298 aaKnown RBP16.3■□□□□ 0.2
MRPL4-209ENST00000591054 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
MRPL4-209ENST00000591054 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
MRPL4-209ENST00000591054 SERTM2A0A1B0GWG4 89 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 FAM74A7A6NL05 159 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 GGTLC3B5MD39 225 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 DIRC3C9JPN6 131 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 GIG44P09565 113 aaPredicted RBP16.29■□□□□ 0.2
MRPL4-209ENST00000591054 BLOC1S1P78537 153 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 C9orf47Q6ZRZ4 202 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 LINC00477Q96M19 166 aa16.29■□□□□ 0.2
MRPL4-209ENST00000591054 YTHDF2Q9Y5A9 579 aaKnown RBP16.29■□□□□ 0.2
MRPL4-209ENST00000591054 TCEAL7Q9BRU2 100 aa16.28■□□□□ 0.2
MRPL4-209ENST00000591054 PPP1R14DQ9NXH3 145 aa16.28■□□□□ 0.2
MRPL4-209ENST00000591054 NBEAL2Q6ZNJ1 2754 aa16.28■□□□□ 0.2
MRPL4-209ENST00000591054 IGKV2-40A0A087WW87 121 aaPredicted RBP16.27■□□□□ 0.2
MRPL4-209ENST00000591054 IGKV2D-40P01614 121 aaPredicted RBP16.27■□□□□ 0.2
MRPL4-209ENST00000591054 UBE2G2P60604 165 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 SUMO1P63165 101 aaKnown RBP16.27■□□□□ 0.2
MRPL4-209ENST00000591054 DEFB135Q30KP9 77 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 RNF183Q96D59 192 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 RCHY1Q96PM5 261 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 SLC35B3Q9H1N7 401 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 MANBALQ9NQG1 85 aa16.27■□□□□ 0.2
MRPL4-209ENST00000591054 A0A1B0GV50 99 aa16.26■□□□□ 0.19
MRPL4-209ENST00000591054 TSPOP30536 169 aa16.26■□□□□ 0.19
MRPL4-209ENST00000591054 PMS2P11Q13670 270 aa16.26■□□□□ 0.19
MRPL4-209ENST00000591054 TMEM78Q5T7P6 136 aa16.26■□□□□ 0.19
MRPL4-209ENST00000591054 TEX261Q6UWH6 196 aa16.26■□□□□ 0.19
MRPL4-209ENST00000591054 COL7A1Q02388 2944 aa16.25■□□□□ 0.19
MRPL4-209ENST00000591054 TRBV7-9A0A0J9YWB2 115 aa16.25■□□□□ 0.19
MRPL4-209ENST00000591054 TCRAP04437 139 aa16.25■□□□□ 0.19
MRPL4-209ENST00000591054 AGPAT4-IT1Q9H0P7 198 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms