RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 K7EPK0 472 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 GAGE7O76087 117 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 GAGE12FP0CL80 117 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 GAGE12GP0CL81 117 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 GAGE12IP0CL82 117 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 CXCL2P19875 107 aa17.73■□□□□ 0.43
CAPNS1-211ENST00000590874 hCG_2014768A0A024R1R8 64 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 TRAV6A0A075B6T7 132 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 PRAC2D3DTV9 90 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 PRAF2O60831 178 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 METTL15P1P0C7V9 234 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 BTF3P20290 206 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 LCN15Q6UWW0 184 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 TMEM14EPQ6UXP3 125 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 S100A7AQ86SG5 101 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 SMIM8Q96KF7 97 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 NPVFQ9HCQ7 196 aa17.72■□□□□ 0.43
CAPNS1-211ENST00000590874 C9orf170A2RU37 121 aa17.71■□□□□ 0.43
CAPNS1-211ENST00000590874 SLC17A3O00476 420 aa17.71■□□□□ 0.43
CAPNS1-211ENST00000590874 CCDC28AQ8IWP9 274 aa17.71■□□□□ 0.43
CAPNS1-211ENST00000590874 SLC50A1Q9BRV3 221 aa17.71■□□□□ 0.43
CAPNS1-211ENST00000590874 MRPS16Q9Y3D3 137 aaKnown RBP17.71■□□□□ 0.43
CAPNS1-211ENST00000590874 A0A1W2PPQ1 181 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 H3BTX0 84 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 RLN2P04090 185 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 BCAP31P51572 246 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 TEPPQ6URK8 271 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 LINC00305Q7Z4B0 112 aa17.7■□□□□ 0.42
CAPNS1-211ENST00000590874 FNDC10F2Z333 226 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 UBE2MP61081 183 aaKnown RBP17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 MORN5Q5VZ52 161 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 ZBTB8BQ8NAP8 495 aaPredicted RBP17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 TMPRSS5Q9H3S3 457 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 ZNF586Q9NXT0 402 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 MGAT4CQ9UBM8 478 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 RNF24Q9Y225 148 aa17.69■□□□□ 0.42
CAPNS1-211ENST00000590874 C7orf66A4D0T2 115 aa17.68■□□□□ 0.42
CAPNS1-211ENST00000590874 H3BNG1 76 aa17.68■□□□□ 0.42
CAPNS1-211ENST00000590874 J3KRW8 73 aa17.68■□□□□ 0.42
CAPNS1-211ENST00000590874 PXDC1Q5TGL8 231 aa17.68■□□□□ 0.42
CAPNS1-211ENST00000590874 OR10P1Q8NGE3 313 aa17.68■□□□□ 0.42
CAPNS1-211ENST00000590874 SNURFLB1AK76 121 aa17.67■□□□□ 0.42
CAPNS1-211ENST00000590874 ZNF546Q86UE3 836 aa17.67■□□□□ 0.42
CAPNS1-211ENST00000590874 CHAC2Q8WUX2 184 aa17.67■□□□□ 0.42
CAPNS1-211ENST00000590874 AGPAT2O15120 278 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 ARL16Q0P5N6 197 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 BPIFA4PQ86YQ2 179 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 TMEM37Q8WXS4 190 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 FLVCR2Q9UPI3 526 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 ALG5Q9Y673 324 aa17.66■□□□□ 0.42
CAPNS1-211ENST00000590874 HERC1Q15751 4861 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 GOSR2O14653 212 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 SCGB1D2O95969 90 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 IGLC2P0DOY2 106 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 LINC00315P59091 139 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 Q6ZTI0 123 aa17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 GPN1Q9HCN4 374 aaPredicted RBP17.65■□□□□ 0.42
CAPNS1-211ENST00000590874 TRAV12-3A0A0B4J271 114 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 H3BQ15 152 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 COX7A2P2O60397 106 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 CT45A10P0DMU9 189 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 OPCMLQ14982 345 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 Q6ZRN7 208 aaPredicted RBP17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 VSIG2Q96IQ7 327 aa17.64■□□□□ 0.41
CAPNS1-211ENST00000590874 A0A096LPF7 62 aa17.63■□□□□ 0.41
CAPNS1-211ENST00000590874 TSC22D2O75157 780 aa17.63■□□□□ 0.41
CAPNS1-211ENST00000590874 SAT2Q96F10 170 aaPredicted RBP17.63■□□□□ 0.41
CAPNS1-211ENST00000590874 MGST2Q99735 147 aa17.63■□□□□ 0.41
CAPNS1-211ENST00000590874 RCL1Q9Y2P8 373 aaKnown RBP17.63■□□□□ 0.41
CAPNS1-211ENST00000590874 LEPP41159 167 aa17.62■□□□□ 0.41
CAPNS1-211ENST00000590874 DAZ2Q13117 558 aaKnown RBP17.62■□□□□ 0.41
CAPNS1-211ENST00000590874 ZNF431Q8TF32 576 aaPredicted RBP17.62■□□□□ 0.41
CAPNS1-211ENST00000590874 ODF3Q96PU9 254 aa17.62■□□□□ 0.41
CAPNS1-211ENST00000590874 PXMP4Q9Y6I8 212 aa17.62■□□□□ 0.41
CAPNS1-211ENST00000590874 NPIPB6E9PJ23 425 aa17.61■□□□□ 0.41
CAPNS1-211ENST00000590874 OR4E1P0C645 316 aa17.61■□□□□ 0.41
CAPNS1-211ENST00000590874 TAS2R30P59541 319 aa17.61■□□□□ 0.41
CAPNS1-211ENST00000590874 IAH1Q2TAA2 248 aaPredicted RBP17.61■□□□□ 0.41
CAPNS1-211ENST00000590874 PYGO2Q9BRQ0 406 aa17.61■□□□□ 0.41
CAPNS1-211ENST00000590874 PFDN1O60925 122 aa17.6■□□□□ 0.41
CAPNS1-211ENST00000590874 FUSP35637 526 aaKnown RBP eCLIP17.6■□□□□ 0.41
CAPNS1-211ENST00000590874 C10orf113Q5VZT2 155 aa17.6■□□□□ 0.41
CAPNS1-211ENST00000590874 TRAV5A0A0B4J249 113 aa17.59■□□□□ 0.41
CAPNS1-211ENST00000590874 C4orf46Q504U0 113 aa17.59■□□□□ 0.41
CAPNS1-211ENST00000590874 C11orf72Q8NBR9 251 aa17.59■□□□□ 0.41
CAPNS1-211ENST00000590874 GGACTQ9BVM4 153 aa17.59■□□□□ 0.41
CAPNS1-211ENST00000590874 GSN-AS1Q9NRJ2 163 aa17.59■□□□□ 0.41
CAPNS1-211ENST00000590874 TRGV2A0A075B6R0 118 aa17.58■□□□□ 0.4
CAPNS1-211ENST00000590874 EPM2AB3EWF7 344 aa17.58■□□□□ 0.4
CAPNS1-211ENST00000590874 GSKIPQ9P0R6 139 aa17.58■□□□□ 0.4
CAPNS1-211ENST00000590874 C18orf15Q96N68 181 aa17.57■□□□□ 0.4
CAPNS1-211ENST00000590874 SEC22CQ9BRL7 303 aa17.57■□□□□ 0.4
CAPNS1-211ENST00000590874 MED28Q9H204 178 aa17.57■□□□□ 0.4
CAPNS1-211ENST00000590874 MBPP02686 304 aaPredicted RBP17.56■□□□□ 0.4
CAPNS1-211ENST00000590874 SIVA1O15304 175 aa17.55■□□□□ 0.4
CAPNS1-211ENST00000590874 GUK1Q16774 197 aa17.55■□□□□ 0.4
CAPNS1-211ENST00000590874 ZNF680Q8NEM1 530 aa17.55■□□□□ 0.4
CAPNS1-211ENST00000590874 DNAJC4Q9NNZ3 241 aa17.55■□□□□ 0.4
CAPNS1-211ENST00000590874 FUT9Q9Y231 359 aa17.55■□□□□ 0.4
CAPNS1-211ENST00000590874 TRGV1A0A0A0MS02 117 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms