RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PPP1R1CQ8WVI7 109 aa12.64□□□□□ -0.39
H3F3B-209ENST00000589949 LINC01587Q99440 93 aa12.64□□□□□ -0.39
H3F3B-209ENST00000589949 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
H3F3B-209ENST00000589949 H3BQ15 152 aa12.63□□□□□ -0.39
H3F3B-209ENST00000589949 B2MP61769 119 aa12.63□□□□□ -0.39
H3F3B-209ENST00000589949 OPCMLQ14982 345 aa12.63□□□□□ -0.39
H3F3B-209ENST00000589949 ZNF546Q86UE3 836 aa12.63□□□□□ -0.39
H3F3B-209ENST00000589949 HTN1P15515 57 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 TAS2R60P59551 318 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 LRRC20Q8TCA0 184 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 GGACTQ9BVM4 153 aa12.62□□□□□ -0.39
H3F3B-209ENST00000589949 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 F5H768 121 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 MPC2O95563 127 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 IGLC2P0DOY2 106 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 LCN15Q6UWW0 184 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 C15orf53Q8NAA6 179 aa12.61□□□□□ -0.39
H3F3B-209ENST00000589949 RNASE8Q8TDE3 154 aaKnown RBP12.61□□□□□ -0.39
H3F3B-209ENST00000589949 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-209ENST00000589949 LSM5Q9Y4Y9 91 aaKnown RBP12.61□□□□□ -0.39
H3F3B-209ENST00000589949 FAM24AA6NFZ4 105 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 HMSDA8MTL9 139 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 COX7A2P2O60397 106 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 CST7O76096 145 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 PET100P0DJ07 73 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 MED14OSP0DP75 135 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 CXCL2P19875 107 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 CDKN1BP46527 198 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 RAB32Q13637 225 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 LRRC37A5PQ49AS3 106 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 MIC13Q5XKP0 118 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 THAP6Q8TBB0 222 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 PPP1R14DQ9NXH3 145 aa12.6□□□□□ -0.39
H3F3B-209ENST00000589949 CBY3A6NI87 242 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 RLN2P04090 185 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 NKX2-5P52952 324 aaPredicted RBP12.59□□□□□ -0.39
H3F3B-209ENST00000589949 C1orf134Q5TEV5 83 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 ZNF575Q86XF7 245 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 BPIFA4PQ86YQ2 179 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 ZNRF2Q8NHG8 242 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 C16orf74Q96GX8 76 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 SLC50A1Q9BRV3 221 aa12.59□□□□□ -0.39
H3F3B-209ENST00000589949 NOP10Q9NPE3 64 aaKnown RBP12.59□□□□□ -0.39
H3F3B-209ENST00000589949 L7N2F9 121 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 NUDT3O95989 172 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 ATP5G1P05496 136 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 ATP5G3P48201 142 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 CAMLGP49069 296 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 VAMP2P63027 116 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 S100A7AQ86SG5 101 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
H3F3B-209ENST00000589949 TIMM8BQ9Y5J9 83 aaPredicted RBP12.58□□□□□ -0.4
H3F3B-209ENST00000589949 FXYD6-FXYD2A0A087WZ82 144 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 H0YIZ8 118 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 CT45A10P0DMU9 189 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 CAV2P51636 162 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 S100A10P60903 97 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 VWC2Q2TAL6 325 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
H3F3B-209ENST00000589949 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 MBD2Q9UBB5 411 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 LINC00588Q9Y4M8 146 aa12.57□□□□□ -0.4
H3F3B-209ENST00000589949 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 H7BYZ3 331 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 FAM3BP58499 235 aaPredicted RBP12.56□□□□□ -0.4
H3F3B-209ENST00000589949 TNP2Q05952 138 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 C9orf62Q8N4C0 152 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 LINC00612Q8N6U2 182 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 ATG101Q9BSB4 218 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 RNF24Q9Y225 148 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 RYR1P21817 5038 aa12.56□□□□□ -0.4
H3F3B-209ENST00000589949 E5RGE8 158 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 J3KRW8 73 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-209ENST00000589949 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 TNFSF18Q9UNG2 199 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 PXMP4Q9Y6I8 212 aa12.55□□□□□ -0.4
H3F3B-209ENST00000589949 NBDYA0A0U1RRE5 68 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 ARPC5O15511 151 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
H3F3B-209ENST00000589949 HOXA5P20719 270 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 TMEM252Q8N6L7 170 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 C20orf144Q9BQM9 153 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 KRTAP4-5Q9BYR2 181 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 HSPB11Q9Y547 144 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 MUC4Q99102 2169 aa12.54□□□□□ -0.4
H3F3B-209ENST00000589949 TRAV12-3A0A0B4J271 114 aa12.53□□□□□ -0.4
H3F3B-209ENST00000589949 UBE2L5PA0A1B0GUS4 154 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms