RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 OR2D3Q8NGH3 330 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 NDFIP1Q9BT67 221 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 CLEC5AQ9NY25 188 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 PSG8Q9UQ74 426 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
ZNF540-208ENST00000589857 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
ZNF540-208ENST00000589857 FAM223BA6NKX1 122 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 A8MWP6 167 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 MRPS12O15235 138 aaKnown RBP8.3□□□□□ -1.08
ZNF540-208ENST00000589857 HSBP1O75506 76 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 CA1P00915 261 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-208ENST00000589857 CD24P25063 80 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 FOXA3P55318 350 aaPredicted RBP8.3□□□□□ -1.08
ZNF540-208ENST00000589857 SLC35B1P78383 322 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 FAM223AQ8IWN6 122 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 DYNAPQ8N1N2 210 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 EXOC3-AS1Q8N2X6 119 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 FAM168AQ92567 244 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 NDUFAF3Q9BU61 184 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
ZNF540-208ENST00000589857 A0A087X0K7 114 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 KIR2DL5BA0A0G2JN68 375 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 KIR2DL5BA0A0G2JPC4 375 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 CENPVL3A0A0U1RRI6 287 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 H3BTX0 84 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 M0QZK8 103 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 BMI1P35226 326 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 CRIP2P52943 208 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-208ENST00000589857 NDPQ00604 133 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 PAX8Q06710 450 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 TEX43Q6ZNM6 134 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 COX8CQ7Z4L0 72 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 KIR2DL5AQ8N109 375 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
ZNF540-208ENST00000589857 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 PRO1933Q9H354 126 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 TMEM160Q9NX00 188 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 ARFGEF3Q5TH69 2177 aa8.29□□□□□ -1.08
ZNF540-208ENST00000589857 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
ZNF540-208ENST00000589857 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 TLN2Q9Y4G6 2542 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 IGHV1-69DA0A0B4J2H0 117 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1B0GUT8 65 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 A0A1W2PS18 150 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 OR2T8A6NH00 312 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 H3BUA1 57 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 NDUFS7O75251 213 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 IGHV1-69P01742 117 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 IGHV4-39P01824 125 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 CTSGP08311 255 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 EGR2P11161 476 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 CAMPP49913 170 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 RHOGP84095 191 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 SRSF2Q01130 221 aaKnown RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 SLAQ13239 276 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 PMCHL1Q16048 86 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 ECSCRQ19T08 205 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 KLF17Q5JT82 389 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 Q6ZWC4 215 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 PGLYRP4Q96LB8 373 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 C20orf144Q9BQM9 153 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-208ENST00000589857 NRN1Q9NPD7 142 aa8.28□□□□□ -1.08
ZNF540-208ENST00000589857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.27□□□□□ -1.09
ZNF540-208ENST00000589857 A0A1B0GUS0 222 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 C20orf202A1L168 122 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 F8W735 103 aaPredicted RBP8.27□□□□□ -1.09
ZNF540-208ENST00000589857 ATP6V0E1O15342 81 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 NUPR1O60356 82 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 BRI3O95415 125 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 SNRPCP09234 159 aaKnown RBP8.27□□□□□ -1.09
ZNF540-208ENST00000589857 OR5AL1P0C617 328 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 GATA3P23771 443 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 LINC00310P59036 64 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 KRTDAPP60985 99 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 C15orf32Q32M92 178 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 KLHDC1Q8N7A1 406 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 GATD1Q8NB37 220 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 C10orf105Q8TEF2 133 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 METTL26Q96S19 204 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 HIF1ANQ9NWT6 349 aa8.27□□□□□ -1.09
ZNF540-208ENST00000589857 TMEM189A5PLL7 270 aa8.26□□□□□ -1.09
ZNF540-208ENST00000589857 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
ZNF540-208ENST00000589857 M0R2Z0 102 aa8.26□□□□□ -1.09
ZNF540-208ENST00000589857 KRTAP1-1Q07627 177 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms