RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FAM78BQ5VT40 261 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 UNQ9165/PRO28630Q6UXU0 137 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 DPPA3Q6W0C5 159 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 TMEM182Q6ZP80 229 aaPredicted RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 RBPMS2Q6ZRY4 209 aaKnown RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 UBE2DNLQ8IWF7 75 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 IQCF2Q8IXL9 164 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 C6orf223Q8N319 242 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 OR10G4Q8NGN3 311 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 OR10G7Q8NGN6 311 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 ST8SIA2Q92186 375 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 ACTR3CQ9C0K3 210 aaPredicted RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 ARV1Q9H2C2 271 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 SLC25A22Q9H936 323 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 MRPL36Q9P0J6 103 aaKnown RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 MRPL27Q9P0M9 148 aaKnown RBP4.35□□□□□ -1.71
VPS25-204ENST00000589577 PLA2G2DQ9UNK4 145 aa4.35□□□□□ -1.71
VPS25-204ENST00000589577 IGKV1D-37A0A075B6S9 117 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 IGKV1OR2-108A0A075B7D4 117 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 IGHV7-4-1A0A0J9YVY3 117 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 F8W735 103 aaPredicted RBP4.34□□□□□ -1.71
VPS25-204ENST00000589577 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
VPS25-204ENST00000589577 TSPAN4O14817 238 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
VPS25-204ENST00000589577 OR7C2O60412 319 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 HBE1P02100 147 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 SPP1P10451 314 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 GATA2P23769 480 aaPredicted RBP4.34□□□□□ -1.71
VPS25-204ENST00000589577 PLP1P60201 277 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 BLOC1S1P78537 153 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 C1orf194Q5T5A4 169 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 FAM122CQ6P4D5 195 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 PQLC2Q6ZP29 291 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 LINC00305Q7Z4B0 112 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 SYT8Q8NBV8 401 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 FAM213BQ8TBF2 198 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 RNF141Q8WVD5 230 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 TMED6Q8WW62 240 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 RHPN1-AS1Q9BWJ2 59 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 SLC25A39Q9BZJ4 359 aaPredicted RBP4.34□□□□□ -1.71
VPS25-204ENST00000589577 WFDC1Q9HC57 220 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 FUT9Q9Y231 359 aa4.34□□□□□ -1.71
VPS25-204ENST00000589577 IGHV3OR16-8A0A075B7F1 116 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 CTXND1A0A1B0GTU2 59 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 ZNF98A6NK75 572 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 ZNF705EA8MWA4 302 aaPredicted RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 IFNA1P01562 189 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 SMR3BP02814 79 aaPredicted RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 H2AFB1P0C5Y9 115 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 CRYBB3P26998 211 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 ID1P41134 155 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 PPT1P50897 306 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 UBE2L3P68036 154 aaKnown RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 USF2Q15853 346 aaPredicted RBP4.33□□□□□ -1.72
VPS25-204ENST00000589577 RNF212Q495C1 297 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 FAM74A1Q5RGS3 127 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 SIGLEC15Q6ZMC9 328 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 C17orf77Q96MU5 243 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 SHANK2-AS3Q9BTD1 123 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 SH3BGRL3Q9H299 93 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 AAMDCQ9H7C9 122 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 ZFAND3Q9H8U3 227 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 CYTL1Q9NRR1 136 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 TMEM167BQ9NRX6 74 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 X6R8D5 127 aa4.33□□□□□ -1.72
VPS25-204ENST00000589577 IGHV3OR16-13A0A075B7E8 117 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 IGHV3-74A0A0B4J1X5 117 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 MAP1LC3B2A6NCE7 125 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 H3BRN7 92 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 CXorf1O96002 111 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 FUSP35637 526 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS25-204ENST00000589577 TAGLN2P37802 199 aaKnown RBP4.32□□□□□ -1.72
VPS25-204ENST00000589577 SULT1A2P50226 295 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 CMC4P56277 68 aaPredicted RBP4.32□□□□□ -1.72
VPS25-204ENST00000589577 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
VPS25-204ENST00000589577 GUK1Q16774 197 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 SFT2D1Q8WV19 159 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 UHRF2Q96PU4 802 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 SLC50A1Q9BRV3 221 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 PAXXQ9BUH6 204 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 MAP1LC3BQ9GZQ8 125 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 OR51M1Q9H341 326 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 CLEC5AQ9NY25 188 aa4.32□□□□□ -1.72
VPS25-204ENST00000589577 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 IGKV3-7A0A075B6H7 116 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 IGHV3-66A0A0C4DH42 116 aa4.31□□□□□ -1.72
VPS25-204ENST00000589577 CHEK1O14757 476 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms