RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RHOBP62745 196 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 OR2G3Q8NGZ4 309 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 FXYD5Q96DB9 178 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 RYR2Q92736 4967 aa12.62□□□□□ -0.39
H3F3B-207ENST00000589417 RNF222A6NCQ9 220 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 M0R2Z0 102 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 INSP01308 110 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 M6PRP20645 277 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 CDKN1BP46527 198 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 INO80EQ8NBZ0 244 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-207ENST00000589417 RNF141Q8WVD5 230 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 PSMG3Q9BT73 122 aaPredicted RBP12.61□□□□□ -0.39
H3F3B-207ENST00000589417 PAXXQ9BUH6 204 aa12.61□□□□□ -0.39
H3F3B-207ENST00000589417 HBE1P02100 147 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 TSPOP30536 169 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 TAS2R45P59539 299 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
H3F3B-207ENST00000589417 LYPD1Q8N2G4 141 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 DNAH1Q9P2D7 4330 aa12.6□□□□□ -0.39
H3F3B-207ENST00000589417 M0R3E3 92 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 JTBO76095 146 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 SERF2P84101 59 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 TMEM256Q8N2U0 113 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
H3F3B-207ENST00000589417 IGHV3OR16-12A0A075B7B8 117 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 TEX48A0A1B0GUV7 120 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 CT45A10P0DMU9 189 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 TCTAP57738 103 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 RPP25LQ8N5L8 163 aaKnown RBP12.58□□□□□ -0.4
H3F3B-207ENST00000589417 BLNKQ8WV28 456 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 CELA1Q9UNI1 258 aa12.58□□□□□ -0.4
H3F3B-207ENST00000589417 TRAV12-2A0A075B6T6 113 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 OR7C2O60412 319 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 OR10J4P0C629 311 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 SPART-AS1P0CW21 52 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 ICAM4Q14773 271 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 PQLC2Q6ZP29 291 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 EXOC3-AS1Q8N2X6 119 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 FAM19A4Q96LR4 140 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 TMEM208Q9BTX3 173 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 DKK2Q9UBU2 259 aa12.57□□□□□ -0.4
H3F3B-207ENST00000589417 FXYD6-FXYD2A0A087WZ82 144 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 LOC102723971A0A1B0GUV8 181 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 MBP02144 154 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 TAS2R60P59551 318 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 Q6ZTC4 211 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 HSD17B11Q8NBQ5 300 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 OR10G4Q8NGN3 311 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 OR10G9Q8NGN4 311 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 OR10G7Q8NGN6 311 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 C2CD4CQ8TF44 421 aa12.56□□□□□ -0.4
H3F3B-207ENST00000589417 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 TRAV10A0A0B4J240 114 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 A0A1W2PPV4 95 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 TAAR5O14804 337 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 NMBP08949 121 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-207ENST00000589417 LEPP41159 167 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 RAB2AP61019 212 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 ARL6IP6Q8N6S5 226 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 GNPNAT1Q96EK6 184 aaPredicted RBP12.55□□□□□ -0.4
H3F3B-207ENST00000589417 PHYHIPLQ96FC7 376 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 AGPAT4-IT1Q9H0P7 198 aa12.55□□□□□ -0.4
H3F3B-207ENST00000589417 BORCS7-ASMTA0A0B4J1R7 106 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 H7BYZ3 331 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 SLC25A5P05141 298 aaKnown RBP12.54□□□□□ -0.4
H3F3B-207ENST00000589417 CRISP2P16562 243 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 UBE2L3P68036 154 aaKnown RBP12.54□□□□□ -0.4
H3F3B-207ENST00000589417 RPL7L1Q6DKI1 246 aaKnown RBP12.54□□□□□ -0.4
H3F3B-207ENST00000589417 SUN5Q8TC36 379 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 LINC01587Q99440 93 aa12.54□□□□□ -0.4
H3F3B-207ENST00000589417 YTHDF2Q9Y5A9 579 aaKnown RBP12.54□□□□□ -0.4
H3F3B-207ENST00000589417 PLAC8L1A1L4L8 177 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 RBAKDNA6NC62 111 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-207ENST00000589417 KLLNB2CW77 178 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
H3F3B-207ENST00000589417 KIR3DS1Q14943 382 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
H3F3B-207ENST00000589417 GFI1BQ5VTD9 330 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms