RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TEX46H3BTG2 121 aa14.44□□□□□ -0.1
CIRBP-220ENST00000588917 EIF3GO75821 320 aaKnown RBP eCLIP14.44□□□□□ -0.1
CIRBP-220ENST00000588917 NHLRC4P0CG21 123 aaPredicted RBP14.44□□□□□ -0.1
CIRBP-220ENST00000588917 SULT1A2P50226 295 aa14.44□□□□□ -0.1
CIRBP-220ENST00000588917 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
CIRBP-220ENST00000588917 MBD3L1Q8WWY6 194 aa14.44□□□□□ -0.1
CIRBP-220ENST00000588917 CSTL1Q9H114 145 aa14.44□□□□□ -0.1
CIRBP-220ENST00000588917 PLA2G2EQ9NZK7 142 aa14.44□□□□□ -0.1
CIRBP-220ENST00000588917 MAP1LC3B2A6NCE7 125 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 H2AFB1P0C5Y9 115 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 RPL35AP18077 110 aaKnown RBP14.43□□□□□ -0.1
CIRBP-220ENST00000588917 CSN1S1P47710 185 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 ICAM4Q14773 271 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 HAGHQ16775 308 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 RXFP4Q8TDU9 374 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 SFT2D1Q8WV19 159 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 MAP1LC3BQ9GZQ8 125 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 OTORQ9NRC9 128 aa14.43□□□□□ -0.1
CIRBP-220ENST00000588917 HLA-DMBP28068 263 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 FHITP49789 147 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 SSX7Q7RTT5 188 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 IQCF2Q8IXL9 164 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 EXOC3-AS1Q8N2X6 119 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 ARL6IP6Q8N6S5 226 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 OR4B1Q8NGF8 309 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 OR8A1Q8NGG7 326 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 OR10J6PQ8NGY7 276 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 NKX6-2Q9C056 277 aaPredicted RBP14.42□□□□□ -0.1
CIRBP-220ENST00000588917 Q9H3A6 140 aa14.42□□□□□ -0.1
CIRBP-220ENST00000588917 PGPA6NDG6 321 aa14.41□□□□□ -0.1
CIRBP-220ENST00000588917 SBSPONQ8IVN8 264 aa14.41□□□□□ -0.1
CIRBP-220ENST00000588917 ZMAT4Q9H898 229 aa14.41□□□□□ -0.1
CIRBP-220ENST00000588917 BOLA1Q9Y3E2 137 aa14.41□□□□□ -0.1
CIRBP-220ENST00000588917 A0A1W2PRE2 83 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 ZNF705FA8MVS1 300 aaPredicted RBP14.4□□□□□ -0.1
CIRBP-220ENST00000588917 F6UB75 175 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 GDF5OSQ5U4N7 250 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 Q6ZWC4 215 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 CMTM2Q8TAZ6 248 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 C1QTNF4Q9BXJ3 329 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 PPP1R14DQ9NXH3 145 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 COL7A1Q02388 2944 aa14.4□□□□□ -0.1
CIRBP-220ENST00000588917 HBE1P02100 147 aa14.39□□□□□ -0.11
CIRBP-220ENST00000588917 PPT1P50897 306 aa14.39□□□□□ -0.11
CIRBP-220ENST00000588917 CNN1P51911 297 aaKnown RBP14.39□□□□□ -0.11
CIRBP-220ENST00000588917 FGF8P55075 233 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-220ENST00000588917 TENM3Q9P273 2699 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 BOLA2-SMG1P6H3BVE0 249 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 M0R3E3 92 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 DEFB1P60022 68 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 HIST1H1AQ02539 215 aaPredicted RBP14.38□□□□□ -0.11
CIRBP-220ENST00000588917 ASCL2Q99929 193 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 SPATA25Q9BR10 227 aa14.38□□□□□ -0.11
CIRBP-220ENST00000588917 KMT2CQ8NEZ4 4911 aaKnown RBP14.37□□□□□ -0.11
CIRBP-220ENST00000588917 TRAV1-1A0A0B4J248 108 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 A8MTW9 85 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-220ENST00000588917 IGKV3-20P01619 116 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 AMBPP02760 352 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 BLOC1S1P78537 153 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 ALKAL2Q6UX46 152 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 LINC00477Q96M19 166 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 TM2D3Q9BRN9 247 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 TMPRSS5Q9H3S3 457 aa14.37□□□□□ -0.11
CIRBP-220ENST00000588917 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
CIRBP-220ENST00000588917 ZNF705EA8MWA4 302 aaPredicted RBP14.36□□□□□ -0.11
CIRBP-220ENST00000588917 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
CIRBP-220ENST00000588917 SUMO1P63165 101 aaKnown RBP14.36□□□□□ -0.11
CIRBP-220ENST00000588917 TP53TG1Q9Y2A0 90 aa14.36□□□□□ -0.11
CIRBP-220ENST00000588917 ARL2-SNX15V9GYD0 113 aa14.36□□□□□ -0.11
CIRBP-220ENST00000588917 SERTM2A0A1B0GWG4 89 aa14.35□□□□□ -0.11
CIRBP-220ENST00000588917 SLC25A5P05141 298 aaKnown RBP14.35□□□□□ -0.11
CIRBP-220ENST00000588917 ZNF705DP0CH99 300 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-220ENST00000588917 ZNF705BP0CI00 300 aaPredicted RBP14.35□□□□□ -0.11
CIRBP-220ENST00000588917 TMEM78Q5T7P6 136 aa14.35□□□□□ -0.11
CIRBP-220ENST00000588917 C5orf17Q8NAS9 161 aa14.35□□□□□ -0.11
CIRBP-220ENST00000588917 DIRC3C9JPN6 131 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 NPIPB6E9PJ23 425 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 K7EQM0 130 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 TSPOP30536 169 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 C9orf47Q6ZRZ4 202 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 RCHY1Q96PM5 261 aa14.34□□□□□ -0.11
CIRBP-220ENST00000588917 FAM74A7A6NL05 159 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 SPRY2O43597 315 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 RNF183Q96D59 192 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 ODF3Q96PU9 254 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 TCEAL7Q9BRU2 100 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 EPDR1Q9UM22 224 aa14.33□□□□□ -0.12
CIRBP-220ENST00000588917 IFNA7P01567 189 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 UBE2G2P60604 165 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 PMS2P11Q13670 270 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 TEX261Q6UWH6 196 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 AMTNQ6UX39 209 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 SLC35B3Q9H1N7 401 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 MANBALQ9NQG1 85 aa14.32□□□□□ -0.12
CIRBP-220ENST00000588917 A0A1B0GV50 99 aa14.31□□□□□ -0.12
CIRBP-220ENST00000588917 FBLL1A6NHQ2 334 aaKnown RBP14.31□□□□□ -0.12
CIRBP-220ENST00000588917 F6UZH7 168 aa14.31□□□□□ -0.12
CIRBP-220ENST00000588917 LEPP41159 167 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms