RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 BCL2P10415 239 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 KRTAP10-11P60412 298 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 UBE2G2P60604 165 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 CST9LP1Q5W188 147 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 EXOC3-AS1Q8N2X6 119 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 RPUSD4Q96CM3 377 aaKnown RBP12.63□□□□□ -0.39
SCAMP4-211ENST00000588907 GGTLC3B5MD39 225 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 F6UZH7 168 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 K7EQM0 130 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 SUMO1P63165 101 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 CCL20P78556 96 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 C20orf173Q96LM9 149 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
SCAMP4-211ENST00000588907 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 FBLL1A6NHQ2 334 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 MEF2BQ02080 365 aaPredicted RBP12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 OR10J6PQ8NGY7 276 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 PRR25Q96S07 402 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 C19orf73Q9NVV2 129 aa12.61□□□□□ -0.39
SCAMP4-211ENST00000588907 M0R3E3 92 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 PDE6DO43924 150 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 STHQ8IWL8 128 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 CCDC28AQ8IWP9 274 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 OR8A1Q8NGG7 326 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 ATG101Q9BSB4 218 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 EPDR1Q9UM22 224 aa12.6□□□□□ -0.39
SCAMP4-211ENST00000588907 A0A0J9YX75 114 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 RBFOX3A6NFN3 312 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 DIRC3C9JPN6 131 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 HLA-DRB4P13762 266 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 Q8N1Y9 231 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 CYB561D1Q8N8Q1 229 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 HLA-DRB4X5D2U9 266 aa12.59□□□□□ -0.39
SCAMP4-211ENST00000588907 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 A8MZ25 164 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 TCRAP04437 139 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 HAGHQ16775 308 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 APRG1Q8IVJ8 170 aa12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
SCAMP4-211ENST00000588907 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 PEX7O00628 323 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 ATP5G3P48201 142 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 ODF3Q96PU9 254 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 TUBA4BQ9H853 241 aa12.57□□□□□ -0.4
SCAMP4-211ENST00000588907 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 H3BMM0 161 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 HIST1H1AQ02539 215 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 TMEM78Q5T7P6 136 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 DEFB125Q8N687 156 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 TMEM75Q8N9X5 138 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 AURKAIP1Q9NWT8 199 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 RPH3ALQ9UNE2 315 aa12.56□□□□□ -0.4
SCAMP4-211ENST00000588907 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 TRBV7-9A0A0J9YWB2 115 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 PEA15Q15121 130 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 TOR2AQ5JU69 321 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 GOLT1AQ6ZVE7 132 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 NOTCH1P46531 2555 aa12.55□□□□□ -0.4
SCAMP4-211ENST00000588907 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 RAB19A4D1S5 217 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 KNCNA6PVL3 124 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 A8MTW9 85 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 F6UB75 175 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 AKR1C3P42330 323 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 GNG5P63218 68 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 FMC1Q96HJ9 113 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
SCAMP4-211ENST00000588907 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms