RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF705DP0CH99 300 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 ZNF705BP0CI00 300 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 FGF8P55075 233 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 EIF5AL1Q6IS14 154 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 EBLN2Q6P2I7 272 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 RPUSD4Q96CM3 377 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 MAP1LC3BQ9GZQ8 125 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 CLEC5AQ9NY25 188 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 RANP62826 216 aaKnown RBP13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 ICAM4Q14773 271 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 IQCF2Q8IXL9 164 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 AAMDCQ9H7C9 122 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 PRAC2D3DTV9 90 aa13.94□□□□□ -0.18
CLPTM1-209ENST00000588855 IGKV3-20P01619 116 aa13.94□□□□□ -0.18
CLPTM1-209ENST00000588855 APOC4P55056 127 aa13.94□□□□□ -0.18
CLPTM1-209ENST00000588855 SUN5Q8TC36 379 aa13.94□□□□□ -0.18
CLPTM1-209ENST00000588855 Q9H3A6 140 aa13.94□□□□□ -0.18
CLPTM1-209ENST00000588855 KIR2DL5BA0A0G2JN68 375 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 KIR2DL5BA0A0G2JPC4 375 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 DPPA3Q6W0C5 159 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 KIR2DL5AQ8N109 375 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 OR4B1Q8NGF8 309 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 OR8A1Q8NGG7 326 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 KIR2DL5BQ8NHK3 375 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 MRPL53Q96EL3 112 aaKnown RBP13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 TMPRSS5Q9H3S3 457 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 PRELID1Q9Y255 219 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 TENM3Q9P273 2699 aa13.93□□□□□ -0.18
CLPTM1-209ENST00000588855 SULT1A2P50226 295 aa13.92□□□□□ -0.18
CLPTM1-209ENST00000588855 CNN1P51911 297 aaKnown RBP13.92□□□□□ -0.18
CLPTM1-209ENST00000588855 HIST1H1AQ02539 215 aaPredicted RBP13.92□□□□□ -0.18
CLPTM1-209ENST00000588855 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
CLPTM1-209ENST00000588855 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
CLPTM1-209ENST00000588855 LYPD1Q8N2G4 141 aa13.91□□□□□ -0.18
CLPTM1-209ENST00000588855 TM2D3Q9BRN9 247 aa13.91□□□□□ -0.18
CLPTM1-209ENST00000588855 A8MTW9 85 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 DUSP14O95147 198 aaKnown RBP13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 CA1P00915 261 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 RAB5CP51148 216 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 MORN3Q6PF18 240 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 ALKAL2Q6UX46 152 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 SFT2D1Q8WV19 159 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 RETNQ9HD89 108 aa13.9□□□□□ -0.18
CLPTM1-209ENST00000588855 A0A1B0GV50 99 aa13.9□□□□□ -0.19
CLPTM1-209ENST00000588855 GIG44P09565 113 aaPredicted RBP13.9□□□□□ -0.19
CLPTM1-209ENST00000588855 CLUHP3Q96NS8 147 aa13.9□□□□□ -0.19
CLPTM1-209ENST00000588855 OTORQ9NRC9 128 aa13.9□□□□□ -0.19
CLPTM1-209ENST00000588855 PGPA6NDG6 321 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 UBE2CO00762 179 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 H2AFB1P0C5Y9 115 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 FXYD7P58549 80 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 DEFB135Q30KP9 77 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 AMTNQ6UX39 209 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 OR10J6PQ8NGY7 276 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 SLC35B3Q9H1N7 401 aa13.89□□□□□ -0.19
CLPTM1-209ENST00000588855 IGKV2-40A0A087WW87 121 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 IGKV2D-40P01614 121 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 NHLRC4P0CG21 123 aaPredicted RBP13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 UBE2G2P60604 165 aa13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 NUTF2P61970 127 aaKnown RBP13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 Q6ZWC4 215 aa13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 YTHDF2Q9Y5A9 579 aaKnown RBP13.87□□□□□ -0.19
CLPTM1-209ENST00000588855 NPIPB6E9PJ23 425 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 CSN1S1P47710 185 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 ERCC8Q13216 396 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 XCL2Q9UBD3 114 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 RPH3ALQ9UNE2 315 aa13.86□□□□□ -0.19
CLPTM1-209ENST00000588855 A0A1W2PRE2 83 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 CMTM2Q8TAZ6 248 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 ZNF705EA8MWA4 302 aaPredicted RBP13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 DIRC3C9JPN6 131 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 M0R2Z0 102 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 SLC25A5P05141 298 aaKnown RBP13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 GNG5P63218 68 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 SPINK13Q1W4C9 94 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 OVOL2Q9BRP0 275 aa13.85□□□□□ -0.19
CLPTM1-209ENST00000588855 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 SUMO1P63165 101 aaKnown RBP13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 RNF183Q96D59 192 aa13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 RCHY1Q96PM5 261 aa13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 VGLL1Q99990 258 aa13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 PPP1R14DQ9NXH3 145 aa13.84□□□□□ -0.19
CLPTM1-209ENST00000588855 TRAV1-1A0A0B4J248 108 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 SPRY2O43597 315 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 CT45A10P0DMU9 189 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 CCL20P78556 96 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 C9orf47Q6ZRZ4 202 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 C5orf17Q8NAS9 161 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 CSNK1G2-AS1Q8NCQ2 148 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 AGPAT4-IT1Q9H0P7 198 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 TP53TG1Q9Y2A0 90 aa13.83□□□□□ -0.2
CLPTM1-209ENST00000588855 STAB2Q8WWQ8 2551 aa13.82□□□□□ -0.2
CLPTM1-209ENST00000588855 GOLT1AQ6ZVE7 132 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms