RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 H3BQ15 152 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 AGPAT2O15120 278 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 RLN2P04090 185 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 ANXA7P20073 488 aaKnown RBP12.65□□□□□ -0.38
CCDC43-204ENST00000588687 DAZ2Q13117 558 aaKnown RBP12.65□□□□□ -0.38
CCDC43-204ENST00000588687 OPCMLQ14982 345 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 Q6ZTI0 123 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 S100A7AQ86SG5 101 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 CCDC190Q86UF4 302 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 MGST2Q99735 147 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 RNF24Q9Y225 148 aa12.65□□□□□ -0.38
CCDC43-204ENST00000588687 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 TSC22D2O75157 780 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 C11orf72Q8NBR9 251 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 OR10P1Q8NGE3 313 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 ZNF431Q8TF32 576 aaPredicted RBP12.64□□□□□ -0.39
CCDC43-204ENST00000588687 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 FLVCR2Q9UPI3 526 aa12.64□□□□□ -0.39
CCDC43-204ENST00000588687 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
CCDC43-204ENST00000588687 NDUFB6O95139 128 aa12.63□□□□□ -0.39
CCDC43-204ENST00000588687 TAS2R30P59541 319 aa12.63□□□□□ -0.39
CCDC43-204ENST00000588687 CCDC28AQ8IWP9 274 aa12.63□□□□□ -0.39
CCDC43-204ENST00000588687 MGAT4CQ9UBM8 478 aa12.63□□□□□ -0.39
CCDC43-204ENST00000588687 TRAV12-3A0A0B4J271 114 aa12.62□□□□□ -0.39
CCDC43-204ENST00000588687 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
CCDC43-204ENST00000588687 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
CCDC43-204ENST00000588687 J3KRW8 73 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 GOSR2O14653 212 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 OR4E1P0C645 316 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 BTCP35070 178 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 GGACTQ9BVM4 153 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 SRRQ9GZT4 340 aa12.61□□□□□ -0.39
CCDC43-204ENST00000588687 C7orf66A4D0T2 115 aa12.6□□□□□ -0.39
CCDC43-204ENST00000588687 COX7A2P2O60397 106 aa12.6□□□□□ -0.39
CCDC43-204ENST00000588687 NOL3O60936 208 aaKnown RBP12.6□□□□□ -0.39
CCDC43-204ENST00000588687 SCGB1D2O95969 90 aa12.6□□□□□ -0.39
CCDC43-204ENST00000588687 FUSP35637 526 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC43-204ENST00000588687 LEPP41159 167 aa12.6□□□□□ -0.39
CCDC43-204ENST00000588687 IAH1Q2TAA2 248 aaPredicted RBP12.6□□□□□ -0.39
CCDC43-204ENST00000588687 FAM19A4Q96LR4 140 aa12.6□□□□□ -0.39
CCDC43-204ENST00000588687 SRRM2Q9UQ35 2752 aaKnown RBP12.6□□□□□ -0.39
CCDC43-204ENST00000588687 KLLNB2CW77 178 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 XGP55808 180 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 C10orf113Q5VZT2 155 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 LINC00467Q9BRT7 94 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 GSN-AS1Q9NRJ2 163 aa12.59□□□□□ -0.39
CCDC43-204ENST00000588687 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
CCDC43-204ENST00000588687 ZNF253O75346 499 aa12.58□□□□□ -0.4
CCDC43-204ENST00000588687 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
CCDC43-204ENST00000588687 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
CCDC43-204ENST00000588687 BAK1Q16611 211 aa12.58□□□□□ -0.4
CCDC43-204ENST00000588687 DNAH8Q96JB1 4490 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 M0R3E3 92 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 SIVA1O15304 175 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 GUK1Q16774 197 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
CCDC43-204ENST00000588687 C7orf71A4D174 169 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 NAP1L6A6NFF2 107 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 SPINK4O60575 86 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 SLC25A5P05141 298 aaKnown RBP12.56□□□□□ -0.4
CCDC43-204ENST00000588687 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 MITD1Q8WV92 249 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 MRPL53Q96EL3 112 aaKnown RBP12.56□□□□□ -0.4
CCDC43-204ENST00000588687 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 FUT9Q9Y231 359 aa12.56□□□□□ -0.4
CCDC43-204ENST00000588687 TRBV19A0A075B6N1 114 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 NXPH4O95158 308 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 NDUFB4O95168 129 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 S100A5P33763 92 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 CAMLGP49069 296 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 TCL1AP56279 114 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 CD300CQ08708 224 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 ERCC8Q13216 396 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 CDPF1Q6NVV7 123 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 NRARPQ7Z6K4 114 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 SDHCQ99643 169 aaPredicted RBP12.55□□□□□ -0.4
CCDC43-204ENST00000588687 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 WDR83OSQ9Y284 106 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 KLF12Q9Y4X4 402 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 TNFRSF18Q9Y5U5 241 aa12.55□□□□□ -0.4
CCDC43-204ENST00000588687 FLG2Q5D862 2391 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-204ENST00000588687 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
CCDC43-204ENST00000588687 DNAH10OSP0CZ25 163 aa12.54□□□□□ -0.4
CCDC43-204ENST00000588687 VWC2Q2TAL6 325 aa12.54□□□□□ -0.4
CCDC43-204ENST00000588687 RBM38Q9H0Z9 239 aaKnown RBP12.54□□□□□ -0.4
CCDC43-204ENST00000588687 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
CCDC43-204ENST00000588687 CRISP2P16562 243 aa12.53□□□□□ -0.4
CCDC43-204ENST00000588687 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
CCDC43-204ENST00000588687 PRR9Q5T870 116 aa12.53□□□□□ -0.4
CCDC43-204ENST00000588687 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
CCDC43-204ENST00000588687 ST6GAL2Q96JF0 529 aa12.53□□□□□ -0.4
CCDC43-204ENST00000588687 CCSO14618 274 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms