RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 RANP62826 216 aaKnown RBP15.08■□□□□ 0
ATG4D-208ENST00000588667 RPUSD4Q96CM3 377 aaKnown RBP15.08■□□□□ 0
ATG4D-208ENST00000588667 GRAMD2BQ96HH9 432 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 TCEAL7Q9BRU2 100 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 NIPSNAP3BQ9BS92 247 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 ZNF586Q9NXT0 402 aa15.08■□□□□ 0
ATG4D-208ENST00000588667 ZNF727A8MUV8 499 aa15.07■□□□□ 0
ATG4D-208ENST00000588667 SNRPCP09234 159 aaKnown RBP15.07■□□□□ 0
ATG4D-208ENST00000588667 TCF24Q7RTU0 167 aa15.07■□□□□ 0
ATG4D-208ENST00000588667 C11orf52Q96A22 123 aa15.07■□□□□ 0
ATG4D-208ENST00000588667 SMIM7Q9BQ49 75 aa15.07■□□□□ 0
ATG4D-208ENST00000588667 PARLQ9H300 379 aa15.07■□□□□ 0
ATG4D-208ENST00000588667 TRBV19A0A075B6N1 114 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 SCO2A0A1W2PP80 73 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 PDE6HQ13956 83 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 ZNF674Q2M3X9 581 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 OR4C46A6NHA9 309 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 NDUFB4O95168 129 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 CD7P09564 240 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 ATF4P18848 351 aaPredicted RBP15.06■□□□□ 0
ATG4D-208ENST00000588667 LYPD1Q8N2G4 141 aa15.06■□□□□ 0
ATG4D-208ENST00000588667 TGP01266 2768 aa15.05■□□□□ -0
ATG4D-208ENST00000588667 H3BTX0 84 aa15.05■□□□□ -0
ATG4D-208ENST00000588667 GALR1P47211 349 aa15.05■□□□□ -0
ATG4D-208ENST00000588667 Q9H3A6 140 aa15.05■□□□□ -0
ATG4D-208ENST00000588667 OTORQ9NRC9 128 aa15.05■□□□□ -0
ATG4D-208ENST00000588667 PGPA6NDG6 321 aa15.04■□□□□ -0
ATG4D-208ENST00000588667 PAFAH1B2P68402 229 aa15.04■□□□□ -0
ATG4D-208ENST00000588667 C16orf54Q6UWD8 224 aa15.04■□□□□ -0
ATG4D-208ENST00000588667 CLRN3Q8NCR9 226 aa15.04■□□□□ -0
ATG4D-208ENST00000588667 GLMPQ8WWB7 406 aa15.04■□□□□ -0
ATG4D-208ENST00000588667 IGKV3-7A0A075B6H7 116 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 M0R036 132 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 IGHV4-30-4P0DP06 118 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 TVP23CQ96ET8 276 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 NAT8Q9UHE5 227 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 A0A087X0K7 114 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 HELTA6NFD8 242 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 A8MZ25 164 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 SLC25A5P05141 298 aaKnown RBP15.03■□□□□ -0
ATG4D-208ENST00000588667 MEOX2P50222 304 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 RPL11P62913 178 aaKnown RBP15.03■□□□□ -0
ATG4D-208ENST00000588667 PSG9Q00887 426 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 PNRC1Q12796 327 aaPredicted RBP15.03■□□□□ -0
ATG4D-208ENST00000588667 TMEM241Q24JQ0 296 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 C5orf17Q8NAS9 161 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 HIST1H2BAQ96A08 127 aa15.03■□□□□ -0
ATG4D-208ENST00000588667 TRAV2A0A0B4J234 112 aa15.02□□□□□ -0.01
ATG4D-208ENST00000588667 ZNF253O75346 499 aa15.02□□□□□ -0.01
ATG4D-208ENST00000588667 C17orf77Q96MU5 243 aa15.02□□□□□ -0.01
ATG4D-208ENST00000588667 B9D2Q9BPU9 175 aa15.02□□□□□ -0.01
ATG4D-208ENST00000588667 MS4A6AQ9H2W1 248 aa15.02□□□□□ -0.01
ATG4D-208ENST00000588667 OR11H12B2RN74 326 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 SIGLEC15Q6ZMC9 328 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 CMTM2Q8TAZ6 248 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 DERL1Q9BUN8 251 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 AAMDCQ9H7C9 122 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 C19orf73Q9NVV2 129 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 EPDR1Q9UM22 224 aa15.01□□□□□ -0.01
ATG4D-208ENST00000588667 PEX7O00628 323 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 AKR1C3P42330 323 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 TFPI2P48307 235 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 ATRAIDQ6UW56 229 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 C2CD4CQ8TF44 421 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 FAM110AQ9BQ89 295 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 WFDC10AQ9H1F0 79 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 SDF2L1Q9HCN8 221 aa15□□□□□ -0.01
ATG4D-208ENST00000588667 DNASE2O00115 360 aaPredicted RBP14.99□□□□□ -0.01
ATG4D-208ENST00000588667 SLC17A3O00476 420 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 FRMD6-AS1P0C7T7 363 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 RPL35P42766 123 aaKnown RBP14.99□□□□□ -0.01
ATG4D-208ENST00000588667 RHEBQ15382 184 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 ODF3L2Q3SX64 289 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 EXOC3-AS1Q8N2X6 119 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 DEFB125Q8N687 156 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 ATG101Q9BSB4 218 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 TUBA4BQ9H853 241 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 DNAH9Q9NYC9 4486 aa14.99□□□□□ -0.01
ATG4D-208ENST00000588667 CNN1P51911 297 aaKnown RBP14.99□□□□□ -0.01
ATG4D-208ENST00000588667 C9JCJ5 164 aa14.98□□□□□ -0.01
ATG4D-208ENST00000588667 SCO1O75880 301 aa14.98□□□□□ -0.01
ATG4D-208ENST00000588667 SLC50A1Q9BRV3 221 aa14.98□□□□□ -0.01
ATG4D-208ENST00000588667 B4DEV8 164 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 TCRAP04437 139 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 CMC4P56277 68 aaPredicted RBP14.97□□□□□ -0.01
ATG4D-208ENST00000588667 GNG5P63218 68 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 WFDC3Q8IUB2 231 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 DCANP1Q8TF63 244 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 SRD5A3Q9H8P0 318 aa14.97□□□□□ -0.01
ATG4D-208ENST00000588667 C7orf77A4D0Y5 90 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 K7EQG2 157 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 S100A9P06702 114 aaKnown RBP14.96□□□□□ -0.01
ATG4D-208ENST00000588667 CSN1S1P47710 185 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 TAS2R60P59551 318 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 NRN1Q9NPD7 142 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 RPS10P5Q9NQ39 176 aa14.96□□□□□ -0.01
ATG4D-208ENST00000588667 ZNF331Q9NQX6 463 aaPredicted RBP14.96□□□□□ -0.01
ATG4D-208ENST00000588667 RPH3ALQ9UNE2 315 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms