RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
SUGP1-208ENST00000588580 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
SUGP1-208ENST00000588580 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
SUGP1-208ENST00000588580 CXorf1O96002 111 aa11.65□□□□□ -0.54
SUGP1-208ENST00000588580 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
SUGP1-208ENST00000588580 RAB5CP51148 216 aa11.65□□□□□ -0.54
SUGP1-208ENST00000588580 PSG3Q16557 428 aa11.65□□□□□ -0.54
SUGP1-208ENST00000588580 GDF5OSQ5U4N7 250 aa11.65□□□□□ -0.54
SUGP1-208ENST00000588580 LINC00052Q96N35 136 aa11.65□□□□□ -0.54
SUGP1-208ENST00000588580 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 FRMD6-AS1P0C7T7 363 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 FGF8P55075 233 aaPredicted RBP11.64□□□□□ -0.55
SUGP1-208ENST00000588580 ALKAL2Q6UX46 152 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 SBSPONQ8IVN8 264 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 STARD9Q9P2P6 4700 aa11.64□□□□□ -0.55
SUGP1-208ENST00000588580 A0A0J9YX75 114 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 A8MTW9 85 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 F6UB75 175 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 M0R3E3 92 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 HLA-DRB4P13762 266 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 PSG9Q00887 426 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 TRPT1Q86TN4 253 aaKnown RBP11.63□□□□□ -0.55
SUGP1-208ENST00000588580 EXOC3-AS1Q8N2X6 119 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 MRPL53Q96EL3 112 aaKnown RBP11.63□□□□□ -0.55
SUGP1-208ENST00000588580 TMPRSS5Q9H3S3 457 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 SAV1Q9H4B6 383 aaPredicted RBP11.63□□□□□ -0.55
SUGP1-208ENST00000588580 TMEM167BQ9NRX6 74 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 CLEC5AQ9NY25 188 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 HLA-DRB4X5D2U9 266 aa11.63□□□□□ -0.55
SUGP1-208ENST00000588580 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
SUGP1-208ENST00000588580 PRAC2D3DTV9 90 aa11.62□□□□□ -0.55
SUGP1-208ENST00000588580 ACTL10Q5JWF8 245 aa11.62□□□□□ -0.55
SUGP1-208ENST00000588580 LYPD1Q8N2G4 141 aa11.62□□□□□ -0.55
SUGP1-208ENST00000588580 ZNF738Q8NE65 137 aa11.62□□□□□ -0.55
SUGP1-208ENST00000588580 RPUSD4Q96CM3 377 aaKnown RBP11.62□□□□□ -0.55
SUGP1-208ENST00000588580 Q9H3A6 140 aa11.62□□□□□ -0.55
SUGP1-208ENST00000588580 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 H3BMM0 161 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
SUGP1-208ENST00000588580 RANP62826 216 aaKnown RBP11.61□□□□□ -0.55
SUGP1-208ENST00000588580 ICAM4Q14773 271 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 SFT2D1Q8WV19 159 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 OTORQ9NRC9 128 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 PRELID1Q9Y255 219 aa11.61□□□□□ -0.55
SUGP1-208ENST00000588580 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
SUGP1-208ENST00000588580 H2AFB1P0C5Y9 115 aa11.6□□□□□ -0.55
SUGP1-208ENST00000588580 OR8A1Q8NGG7 326 aa11.6□□□□□ -0.55
SUGP1-208ENST00000588580 CLUHP3Q96NS8 147 aa11.6□□□□□ -0.55
SUGP1-208ENST00000588580 AAMDCQ9H7C9 122 aa11.6□□□□□ -0.55
SUGP1-208ENST00000588580 YTHDF2Q9Y5A9 579 aaKnown RBP11.6□□□□□ -0.55
SUGP1-208ENST00000588580 LOC102724200A0A096LPH7 203 aaPredicted RBP11.59□□□□□ -0.55
SUGP1-208ENST00000588580 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
SUGP1-208ENST00000588580 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
SUGP1-208ENST00000588580 STHQ8IWL8 128 aa11.59□□□□□ -0.55
SUGP1-208ENST00000588580 IQCF2Q8IXL9 164 aa11.59□□□□□ -0.55
SUGP1-208ENST00000588580 A0A1B0GV50 99 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 FAM74A7A6NL05 159 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 ZNF705EA8MWA4 302 aaPredicted RBP11.58□□□□□ -0.56
SUGP1-208ENST00000588580 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
SUGP1-208ENST00000588580 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
SUGP1-208ENST00000588580 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
SUGP1-208ENST00000588580 CNN1P51911 297 aaKnown RBP11.58□□□□□ -0.56
SUGP1-208ENST00000588580 CCL20P78556 96 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 ARL2-SNX15V9GYD0 113 aa11.58□□□□□ -0.56
SUGP1-208ENST00000588580 KIR2DL5BA0A0G2JN68 375 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 KIR2DL5BA0A0G2JPC4 375 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 HIST1H1AQ02539 215 aaPredicted RBP11.57□□□□□ -0.56
SUGP1-208ENST00000588580 HAGHQ16775 308 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 EBLN2Q6P2I7 272 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 KIR2DL5AQ8N109 375 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 ZNF680Q8NEM1 530 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 KIR2DL5BQ8NHK3 375 aa11.57□□□□□ -0.56
SUGP1-208ENST00000588580 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
SUGP1-208ENST00000588580 PGPA6NDG6 321 aa11.56□□□□□ -0.56
SUGP1-208ENST00000588580 DUSP14O95147 198 aaKnown RBP11.56□□□□□ -0.56
SUGP1-208ENST00000588580 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
SUGP1-208ENST00000588580 UBE2G2P60604 165 aa11.56□□□□□ -0.56
SUGP1-208ENST00000588580 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
SUGP1-208ENST00000588580 LYPD6BQ8NI32 183 aa11.56□□□□□ -0.56
SUGP1-208ENST00000588580 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 HBE1P02100 147 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 CCDC28AQ8IWP9 274 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 OR4B1Q8NGF8 309 aa11.55□□□□□ -0.56
SUGP1-208ENST00000588580 APOC4P55056 127 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 SUMO1P63165 101 aaKnown RBP11.54□□□□□ -0.56
SUGP1-208ENST00000588580 GNG5P63218 68 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 PMS2P11Q13670 270 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
SUGP1-208ENST00000588580 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 RXFP4Q8TDU9 374 aa11.54□□□□□ -0.56
SUGP1-208ENST00000588580 VGLL1Q99990 258 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms