RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 HBG2P69892 147 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 IL15RAQ13261 267 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 RAB31Q13636 194 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 FCN2Q15485 313 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 LRRC37A5PQ49AS3 106 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 STX12Q86Y82 276 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 TMEM252Q8N6L7 170 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 C20orf173Q96LM9 149 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 MGST2Q99735 147 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 MARVELD1Q9BSK0 173 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 ARV1Q9H2C2 271 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 RPRMQ9NS64 109 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 UQCC1Q9NVA1 299 aa7.66□□□□□ -1.18
VPS4B-202ENST00000588059 UBE2L5PA0A1B0GUS4 154 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 M0R2Z0 102 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 CRXO43186 299 aaPredicted RBP7.65□□□□□ -1.18
VPS4B-202ENST00000588059 COX7A2P2O60397 106 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 INSP01308 110 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 S100A11P31949 105 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 CAMLGP49069 296 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 BAXQ07812 192 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 PXDC1Q5TGL8 231 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 IGFL4Q6B9Z1 124 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 PATE2Q6UY27 113 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 LRRC20Q8TCA0 184 aa7.65□□□□□ -1.18
VPS4B-202ENST00000588059 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 CBY3A6NI87 242 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 AZU1P20160 251 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS4B-202ENST00000588059 CYCSP99999 105 aaKnown RBP7.64□□□□□ -1.19
VPS4B-202ENST00000588059 SPINK13Q1W4C9 94 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 Q6ZRG5 221 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 Q6ZRN7 208 aaPredicted RBP7.64□□□□□ -1.19
VPS4B-202ENST00000588059 LINC00305Q7Z4B0 112 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 BAP18Q8IXM2 172 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 RNF182Q8N6D2 247 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 ZNF738Q8NE65 137 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 OR11H7Q8NGC8 314 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 FRZBQ92765 325 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 C18orf15Q96N68 181 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 UPK3BQ9BT76 320 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 NMES1Q9C002 83 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 ZNF586Q9NXT0 402 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 RNF24Q9Y225 148 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 WDR83OSQ9Y284 106 aa7.64□□□□□ -1.19
VPS4B-202ENST00000588059 E5RGE8 158 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
VPS4B-202ENST00000588059 FGF7P21781 194 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 CNN1P51911 297 aaKnown RBP7.63□□□□□ -1.19
VPS4B-202ENST00000588059 B2MP61769 119 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 NHLH2Q02577 135 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 ATP6V1FQ16864 119 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 VWC2Q2TAL6 325 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 C10orf113Q5VZT2 155 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 MIC13Q5XKP0 118 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 SLC25A31Q9H0C2 315 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 OR5AC2Q9NZP5 309 aa7.63□□□□□ -1.19
VPS4B-202ENST00000588059 TRAV8-2A0A0B4J237 113 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 H2BFSP57053 126 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 LINC00315P59091 139 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 OR1L4Q8NGR5 311 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 TMEM37Q8WXS4 190 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 DNAJC4Q9NNZ3 241 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
VPS4B-202ENST00000588059 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
VPS4B-202ENST00000588059 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 TRAV26-1A0A087WT03 109 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 A0A087X0K7 114 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 H0YIZ8 118 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 H3BTX0 84 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 DUSP14O95147 198 aaKnown RBP7.61□□□□□ -1.19
VPS4B-202ENST00000588059 PRB4P10163 310 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-202ENST00000588059 OPCMLQ14982 345 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 ESRGQ1W209 222 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 MORN5Q5VZ52 161 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 CDPF1Q6NVV7 123 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 BPIFA4PQ86YQ2 179 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 OR5C1Q8NGR4 320 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 THAP6Q8TBB0 222 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 RXFP4Q8TDU9 374 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 PPP1R1CQ8WVI7 109 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 GNPNAT1Q96EK6 184 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-202ENST00000588059 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 PFDN5Q99471 154 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 SLC39A9Q9NUM3 307 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 PXMP4Q9Y6I8 212 aa7.61□□□□□ -1.19
VPS4B-202ENST00000588059 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 TRAV5A0A0B4J249 113 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 BOLA2-SMG1P6H3BVE0 249 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 MRPS12O15235 138 aaKnown RBP7.6□□□□□ -1.19
VPS4B-202ENST00000588059 PET100P0DJ07 73 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 CXCL3P19876 107 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 M6PRP20645 277 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 RPL29P47914 159 aaKnown RBP7.6□□□□□ -1.19
VPS4B-202ENST00000588059 RHOBP62745 196 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 HIST1H1AQ02539 215 aaPredicted RBP7.6□□□□□ -1.19
VPS4B-202ENST00000588059 PSG3Q16557 428 aa7.6□□□□□ -1.19
VPS4B-202ENST00000588059 LCN15Q6UWW0 184 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms