RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 LOC102724200A0A096LPH7 203 aaPredicted RBP7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 A0A0J9YX75 114 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 H3BMM0 161 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 H2AFB1P0C5Y9 115 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 HLA-DRB4P13762 266 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 RAB5CP51148 216 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 TRPT1Q86TN4 253 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 STHQ8IWL8 128 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 AAMDCQ9H7C9 122 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 HLA-DRB4X5D2U9 266 aa7.88□□□□□ -1.15
SMARCA4-213ENST00000587988 PGPA6NDG6 321 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 ZNF705EA8MWA4 302 aaPredicted RBP7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 IGKV3-20P01619 116 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 UBE2G2P60604 165 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 CCL20P78556 96 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 HAGHQ16775 308 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 EBLN2Q6P2I7 272 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 SBSPONQ8IVN8 264 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 OR4B1Q8NGF8 309 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 OR8A1Q8NGG7 326 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 ASCL2Q99929 193 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 OTORQ9NRC9 128 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 CLEC5AQ9NY25 188 aa7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
SMARCA4-213ENST00000587988 CNN1P51911 297 aaKnown RBP7.86□□□□□ -1.15
SMARCA4-213ENST00000587988 HIST1H1AQ02539 215 aaPredicted RBP7.86□□□□□ -1.15
SMARCA4-213ENST00000587988 TEX261Q6UWH6 196 aa7.86□□□□□ -1.15
SMARCA4-213ENST00000587988 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
SMARCA4-213ENST00000587988 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
SMARCA4-213ENST00000587988 IGKV2-40A0A087WW87 121 aaPredicted RBP7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 A0A1W2PRE2 83 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 A8MTW9 85 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 IGKV2D-40P01614 121 aaPredicted RBP7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 FXYD7P58549 80 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 SUMO1P63165 101 aaKnown RBP7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 GNG5P63218 68 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 ERCC8Q13216 396 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 AMTNQ6UX39 209 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 B9D2Q9BPU9 175 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 CSTL1Q9H114 145 aa7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
SMARCA4-213ENST00000587988 FBN3Q75N90 2809 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 MEGF8Q7Z7M0 2845 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 KIR2DL5BA0A0G2JN68 375 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 KIR2DL5BA0A0G2JPC4 375 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 DIRC3C9JPN6 131 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 PAGE4O60829 102 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 DUSP14O95147 198 aaKnown RBP7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 SLC25A5P05141 298 aaKnown RBP7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 KIR2DL5AQ8N109 375 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 ZNF680Q8NEM1 530 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 KIR2DL5BQ8NHK3 375 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 PCNPQ8WW12 178 aaKnown RBP7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 CLUHP3Q96NS8 147 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 VGLL1Q99990 258 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 SLC35B3Q9H1N7 401 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
SMARCA4-213ENST00000587988 NPIPB6E9PJ23 425 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CA1P00915 261 aaPredicted RBP7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 HBE1P02100 147 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CT45A10P0DMU9 189 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CSN1S1P47710 185 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 ATP5G3P48201 142 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 APOC4P55056 127 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 BLOC1S1P78537 153 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CST9LP1Q5W188 147 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CCDC28AQ8IWP9 274 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 OR10J6PQ8NGY7 276 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 RXFP4Q8TDU9 374 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 AGPAT4-IT1Q9H0P7 198 aa7.83□□□□□ -1.16
SMARCA4-213ENST00000587988 M0R2Z0 102 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 KIR3DS1Q14943 382 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 SPINK13Q1W4C9 94 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 MORN3Q6PF18 240 aaPredicted RBP7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 C9orf47Q6ZRZ4 202 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 GOLT1AQ6ZVE7 132 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 TM2D3Q9BRN9 247 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 RETNQ9HD89 108 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 GNG13Q9P2W3 67 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 EPDR1Q9UM22 224 aa7.82□□□□□ -1.16
SMARCA4-213ENST00000587988 DNAH9Q9NYC9 4486 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 TRAV8-1A0A0A6YYK1 113 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 RBAKDNA6NC62 111 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 TEX46H3BTG2 121 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 UBE2CO00762 179 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 CRXO43186 299 aaPredicted RBP7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 IFNA7P01567 189 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 TCRAP04437 139 aa7.81□□□□□ -1.16
SMARCA4-213ENST00000587988 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms