RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, human

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-209	ENST00000587700		M0QZ24	198 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	NDUFB3	O43676	98 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	NUDT3	O95989	172 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	PPIAL4F	P0DN26	164 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	COL8A1	P27658	744 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	SEC61G	P60059	68 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	HIST1H1A	Q02539	215 aa	Predicted RBP	7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	SGK494	Q96LW2	274 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	ZNF835	Q9Y2P0	537 aa		7.34	□□□□□ -1.23
RFX2-209	ENST00000587700	TMEM89	A2RUT3	159 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	TMEM178B	H3BS89	294 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700		J3QKU1	62 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	OVOL3	O00110	214 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	CD5L	O43866	347 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	CRYGB	P07316	175 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	RIG	Q13278	110 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	TPSG1	Q9NRR2	321 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700		A0A1B0GUT8	65 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	TOX4	O94842	621 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	IGLV2-11	P01706	119 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	PPBP	P02775	128 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	TMEM155	Q4W5P6	130 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	HCP5	Q6MZN7	132 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	C8orf86	Q6ZUL3	223 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	JMJD8	Q96S16	334 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	RAX	Q9Y2V3	346 aa		7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	F11R	Q9Y624	299 aa	Known RBP	7.33	□□□□□ -1.24
RFX2-209	ENST00000587700	COL6A6	A6NMZ7	2263 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	LYNX1	G3V0Z9	82 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	LYNX1	P0DP58	116 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	HTR1D	P28221	377 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	RUSC1-AS1	Q66K80	236 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700		Q6AWC8	147 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	TMEM75	Q8N9X5	138 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	NEU4	Q8WWR8	484 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	KAAG1	Q9UBP8	84 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	CTSZ	Q9UBR2	303 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	HRNR	Q86YZ3	2850 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX2-209	ENST00000587700		E7EQL1	145 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700		K7ENP7	123 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	WIPF1	O43516	503 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	COX8A	P10176	69 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	LOX	P28300	417 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	LYPD1	Q8N2G4	141 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	CIART	Q8N365	385 aa	Predicted RBP	7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	LINC01560	Q8TB33	94 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	PLXNB1	O43157	2135 aa		7.32	□□□□□ -1.24
RFX2-209	ENST00000587700	SHISA9	B4DS77	424 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	BRI3	O95415	125 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	IGLC1	P0CG04	106 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	IGHV1-8	P0DP01	117 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	CD24	P25063	80 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	CSN1S1	P47710	185 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	ATP5J2	P56134	94 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	RNASE6	Q93091	150 aa	Known RBP	7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	RITA1	Q96K30	269 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	ZNF747	Q9BV97	191 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	SIGLEC9	Q9Y336	463 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	MUC21	A0A0G2JKD1	596 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	MUC21	A0A140T8X8	626 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	ENSA	O43768	121 aa	Known RBP	7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	PSG1	P11464	419 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	GPR183	P32249	361 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	CDSN	Q15517	529 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	MUC21	Q5SSG8	566 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	GOLT1A	Q6ZVE7	132 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	PRNT	Q86SH4	94 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	OR10AG1	Q8NH19	301 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	TMEM133	Q9H2Q1	129 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	DYNLRB1	Q9NP97	96 aa		7.31	□□□□□ -1.24
RFX2-209	ENST00000587700	NAV3	Q8IVL0	2385 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	LYZ	P61626	148 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	ARF6	P62330	175 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	SEC11A	P67812	179 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	DUX5	Q96PT3	197 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	TRBV19	A0A075B6N1	114 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	TRAV8-1	A0A0A6YYK1	113 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	7.3	□□□□□ -1.24
RFX2-209	ENST00000587700		H3BTX0	84 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700		I3L2K1	104 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	LY6H	O94772	140 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	PRR31	Q5SQ13	230 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	ZNF493	Q6ZR52	646 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	FA2H	Q7L5A8	372 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	LHFPL4	Q7Z7J7	247 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	SRSF12	Q8WXF0	261 aa	Known RBP	7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	ZC2HC1A	Q96GY0	325 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	SHANK2-AS3	Q9BTD1	123 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	TP73-AS1	Q9UF72	201 aa		7.3	□□□□□ -1.24
RFX2-209	ENST00000587700	MALRD1	Q5VYJ5	2156 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	IGHV3-72	A0A0B4J1Y9	119 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	OR2T8	A6NH00	312 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	FBLL1	A6NHQ2	334 aa	Known RBP	7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	ARMS2	P0C7Q2	107 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	ZNF138	P52744	262 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	SIGLEC15	Q6ZMC9	328 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	PPP1R27	Q86WC6	154 aa		7.29	□□□□□ -1.24
RFX2-209	ENST00000587700	BPIFA4P	Q86YQ2	179 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms