RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 LINC01587Q99440 93 aa12.61□□□□□ -0.39
TPM4-206ENST00000587201 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 HTN3P15516 51 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 H2BFSP57053 126 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 DAD1P61803 113 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 CLINT1Q14677 625 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 OXA1LQ15070 435 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 PPP1R1CQ8WVI7 109 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 ZNF586Q9NXT0 402 aa12.6□□□□□ -0.39
TPM4-206ENST00000587201 TMEM256Q8N2U0 113 aa12.59□□□□□ -0.39
TPM4-206ENST00000587201 HTN1P15515 57 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 AZU1P20160 251 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 TSPOP30536 169 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 GCSAMLQ5JQS6 135 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
TPM4-206ENST00000587201 TMEM14CQ9P0S9 112 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
TPM4-206ENST00000587201 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 LYRM9A8MSI8 78 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 ZNF253O75346 499 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 PET100P0DJ07 73 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 P0DMU3 169 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 PYYP10082 97 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 HIST1H1EP10412 219 aaKnown RBP12.57□□□□□ -0.4
TPM4-206ENST00000587201 TAS2R60P59551 318 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 WDR61Q9GZS3 305 aaKnown RBP12.57□□□□□ -0.4
TPM4-206ENST00000587201 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
TPM4-206ENST00000587201 MPC2O95563 127 aa12.56□□□□□ -0.4
TPM4-206ENST00000587201 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
TPM4-206ENST00000587201 C17orf112F2Z3M2 114 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 J3KRW8 73 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 DEFB130BP0DP73 79 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 DEFB130AP0DP74 79 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 ATP5SQ99766 215 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 C20orf144Q9BQM9 153 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 DNAH6Q9C0G6 4158 aa12.55□□□□□ -0.4
TPM4-206ENST00000587201 FRAS1Q86XX4 4008 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 NPIPB6E9PJ23 425 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 H7BYZ3 331 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 M0R3E3 92 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 NDUFB4O95168 129 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 PDE6HQ13956 83 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 FCN2Q15485 313 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
TPM4-206ENST00000587201 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 HSPB11Q9Y547 144 aa12.54□□□□□ -0.4
TPM4-206ENST00000587201 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
TPM4-206ENST00000587201 LEPP41159 167 aa12.53□□□□□ -0.4
TPM4-206ENST00000587201 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
TPM4-206ENST00000587201 MRPL32Q9BYC8 188 aaKnown RBP12.53□□□□□ -0.4
TPM4-206ENST00000587201 OR51M1Q9H341 326 aa12.53□□□□□ -0.4
TPM4-206ENST00000587201 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
TPM4-206ENST00000587201 IFNA5P01569 189 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 ERCC8Q13216 396 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 TMEM88Q6PEY1 159 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 ZNF493Q6ZR52 646 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 UBE2DNLQ8IWF7 75 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 CCDC28AQ8IWP9 274 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 EXOC3-AS1Q8N2X6 119 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
TPM4-206ENST00000587201 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 MBD2Q9UBB5 411 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 FUT9Q9Y231 359 aa12.52□□□□□ -0.41
TPM4-206ENST00000587201 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.41
TPM4-206ENST00000587201 NBEAP1P0C6P0 100 aa12.51□□□□□ -0.41
TPM4-206ENST00000587201 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
TPM4-206ENST00000587201 RNASE8Q8TDE3 154 aaKnown RBP12.51□□□□□ -0.41
TPM4-206ENST00000587201 PAXXQ9BUH6 204 aa12.51□□□□□ -0.41
TPM4-206ENST00000587201 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
TPM4-206ENST00000587201 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
TPM4-206ENST00000587201 DNAH10Q8IVF4 4471 aa12.51□□□□□ -0.41
TPM4-206ENST00000587201 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
TPM4-206ENST00000587201 OR10J4P0C629 311 aa12.5□□□□□ -0.41
TPM4-206ENST00000587201 ICAM4Q14773 271 aa12.5□□□□□ -0.41
TPM4-206ENST00000587201 FFAR4Q5NUL3 377 aa12.5□□□□□ -0.41
TPM4-206ENST00000587201 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
TPM4-206ENST00000587201 CBY3A6NI87 242 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 F5H768 121 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 OR7C2O60412 319 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 ATP5G1P05496 136 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 ATP5G3P48201 142 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 FAM122CQ6P4D5 195 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
TPM4-206ENST00000587201 PTTG1O95997 202 aa12.48□□□□□ -0.41
TPM4-206ENST00000587201 SLC25A5P05141 298 aaKnown RBP12.48□□□□□ -0.41
TPM4-206ENST00000587201 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
TPM4-206ENST00000587201 FXYD5Q96DB9 178 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms