RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 MPDU1O75352 247 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 MPC2O95563 127 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 HTN3P15516 51 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 AZU1P20160 251 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 NIPSNAP3BQ9BS92 247 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 KMT2AQ03164 3969 aa20.01■□□□□ 0.79
LIG3-208ENST00000586407 MIR17HGQ75NE6 70 aa19.99■□□□□ 0.79
LIG3-208ENST00000586407 LINC01587Q99440 93 aa19.99■□□□□ 0.79
LIG3-208ENST00000586407 WDR61Q9GZS3 305 aaKnown RBP19.99■□□□□ 0.79
LIG3-208ENST00000586407 M0R3E3 92 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 HTN1P15515 57 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 OR10J6PQ8NGY7 276 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 SLC25A2Q9BXI2 301 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 SMIM3Q9BZL3 60 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 ALG5Q9Y673 324 aa19.98■□□□□ 0.79
LIG3-208ENST00000586407 TRBV19A0A075B6N1 114 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 J3KRW8 73 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 NDUFB4O95168 129 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 CDKN1BP46527 198 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 GUK1Q16774 197 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 BLNKQ8WV28 456 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 TMEM14CQ9P0S9 112 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 MBD2Q9UBB5 411 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 HSPB11Q9Y547 144 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 VPS13DQ5THJ4 4388 aa19.97■□□□□ 0.79
LIG3-208ENST00000586407 TEX48A0A1B0GUV7 120 aa19.96■□□□□ 0.79
LIG3-208ENST00000586407 DAD1P61803 113 aa19.96■□□□□ 0.79
LIG3-208ENST00000586407 FAM167A-AS1Q96KT0 104 aa19.96■□□□□ 0.79
LIG3-208ENST00000586407 PLAC8L1A1L4L8 177 aa19.95■□□□□ 0.78
LIG3-208ENST00000586407 FCN2Q15485 313 aa19.95■□□□□ 0.78
LIG3-208ENST00000586407 ATP5SQ99766 215 aa19.95■□□□□ 0.78
LIG3-208ENST00000586407 NDUFAF3Q9BU61 184 aa19.95■□□□□ 0.78
LIG3-208ENST00000586407 CT45A10P0DMU9 189 aa19.94■□□□□ 0.78
LIG3-208ENST00000586407 HIST1H1EP10412 219 aaKnown RBP19.94■□□□□ 0.78
LIG3-208ENST00000586407 GFI1BQ5VTD9 330 aa19.94■□□□□ 0.78
LIG3-208ENST00000586407 EXOC3-AS1Q8N2X6 119 aa19.94■□□□□ 0.78
LIG3-208ENST00000586407 ZNF253O75346 499 aa19.93■□□□□ 0.78
LIG3-208ENST00000586407 RPL12P30050 165 aaKnown RBP19.93■□□□□ 0.78
LIG3-208ENST00000586407 TIMM9Q9Y5J7 89 aa19.93■□□□□ 0.78
LIG3-208ENST00000586407 NPIPB6E9PJ23 425 aa19.92■□□□□ 0.78
LIG3-208ENST00000586407 PET100P0DJ07 73 aa19.92■□□□□ 0.78
LIG3-208ENST00000586407 TAS2R60P59551 318 aa19.92■□□□□ 0.78
LIG3-208ENST00000586407 ERCC8Q13216 396 aa19.92■□□□□ 0.78
LIG3-208ENST00000586407 DEFB130BP0DP73 79 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 DEFB130AP0DP74 79 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 TSPOP30536 169 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 OXA1LQ15070 435 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 TMEM256Q8N2U0 113 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 WFDC1Q9HC57 220 aa19.91■□□□□ 0.78
LIG3-208ENST00000586407 EIF3GO75821 320 aaKnown RBP eCLIP19.9■□□□□ 0.78
LIG3-208ENST00000586407 OR10J4P0C629 311 aa19.9■□□□□ 0.78
LIG3-208ENST00000586407 KCNIP2Q9NS61 270 aa19.9■□□□□ 0.78
LIG3-208ENST00000586407 BIRC6Q9NR09 4857 aa19.9■□□□□ 0.78
LIG3-208ENST00000586407 C17orf112F2Z3M2 114 aa19.89■□□□□ 0.77
LIG3-208ENST00000586407 FFAR4Q5NUL3 377 aa19.89■□□□□ 0.77
LIG3-208ENST00000586407 OR51M1Q9H341 326 aa19.89■□□□□ 0.77
LIG3-208ENST00000586407 LYRM9A8MSI8 78 aa19.88■□□□□ 0.77
LIG3-208ENST00000586407 PTTG1O95997 202 aa19.88■□□□□ 0.77
LIG3-208ENST00000586407 ICAM4Q14773 271 aa19.88■□□□□ 0.77
LIG3-208ENST00000586407 MRPL53Q96EL3 112 aaKnown RBP19.88■□□□□ 0.77
LIG3-208ENST00000586407 FUT9Q9Y231 359 aa19.88■□□□□ 0.77
LIG3-208ENST00000586407 TRAV12-3A0A0B4J271 114 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 H7BYZ3 331 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 LEPP41159 167 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 PDE6HQ13956 83 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 FAM122CQ6P4D5 195 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 TMEM88Q6PEY1 159 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 FXYD5Q96DB9 178 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 PAXXQ9BUH6 204 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 MRPL32Q9BYC8 188 aaKnown RBP19.87■□□□□ 0.77
LIG3-208ENST00000586407 DNAH6Q9C0G6 4158 aa19.87■□□□□ 0.77
LIG3-208ENST00000586407 IGKV2-40A0A087WW87 121 aaPredicted RBP19.86■□□□□ 0.77
LIG3-208ENST00000586407 IFNA5P01569 189 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 IGKV2D-40P01614 121 aaPredicted RBP19.86■□□□□ 0.77
LIG3-208ENST00000586407 NBEAP1P0C6P0 100 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 SCGB1C1Q8TD33 95 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 ZNF503Q96F45 646 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 PHYHIPLQ96FC7 376 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 C16orf74Q96GX8 76 aa19.86■□□□□ 0.77
LIG3-208ENST00000586407 RNASE8Q8TDE3 154 aaKnown RBP19.85■□□□□ 0.77
LIG3-208ENST00000586407 ODF3Q96PU9 254 aa19.85■□□□□ 0.77
LIG3-208ENST00000586407 AGPAT4-IT1Q9H0P7 198 aa19.85■□□□□ 0.77
LIG3-208ENST00000586407 AAMDCQ9H7C9 122 aa19.85■□□□□ 0.77
LIG3-208ENST00000586407 NOP10Q9NPE3 64 aaKnown RBP19.85■□□□□ 0.77
LIG3-208ENST00000586407 PRELID1Q9Y255 219 aa19.85■□□□□ 0.77
LIG3-208ENST00000586407 OR7C2O60412 319 aa19.84■□□□□ 0.77
LIG3-208ENST00000586407 RNF141Q8WVD5 230 aa19.84■□□□□ 0.77
LIG3-208ENST00000586407 C20orf144Q9BQM9 153 aa19.84■□□□□ 0.77
LIG3-208ENST00000586407 P0DMU3 169 aa19.83■□□□□ 0.77
LIG3-208ENST00000586407 FAM231AP0DMU4 169 aa19.83■□□□□ 0.77
LIG3-208ENST00000586407 FAM231CP0DMU5 169 aa19.83■□□□□ 0.77
LIG3-208ENST00000586407 TMEM263Q8WUH6 116 aaKnown RBP19.83■□□□□ 0.77
LIG3-208ENST00000586407 MED28Q9H204 178 aa19.83■□□□□ 0.77
LIG3-208ENST00000586407 POM121L12Q8N7R1 296 aa19.82■□□□□ 0.76
LIG3-208ENST00000586407 FAM210BQ96KR6 192 aa19.82■□□□□ 0.76
LIG3-208ENST00000586407 VGLL1Q99990 258 aa19.82■□□□□ 0.76
LIG3-208ENST00000586407 DNAH10Q8IVF4 4471 aa19.81■□□□□ 0.76
LIG3-208ENST00000586407 CD300CQ08708 224 aa19.81■□□□□ 0.76
LIG3-208ENST00000586407 BTN1A1Q13410 526 aa19.81■□□□□ 0.76
LIG3-208ENST00000586407 TIMM8BQ9Y5J9 83 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms