RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TCRAP04437 139 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 SLC25A5P05141 298 aaKnown RBP9.58□□□□□ -0.88
VMP1-202ENST00000585847 GNG4P50150 75 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 BLNKQ8WV28 456 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 RHPN1-AS1Q9BWJ2 59 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 CTDSP1Q9GZU7 261 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 NRN1Q9NPD7 142 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 ZNF331Q9NQX6 463 aaPredicted RBP9.58□□□□□ -0.88
VMP1-202ENST00000585847 TMEM242Q9NWH2 141 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 MLXQ9UH92 298 aa9.58□□□□□ -0.88
VMP1-202ENST00000585847 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 PGPA6NDG6 321 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 CHEK1O14757 476 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
VMP1-202ENST00000585847 PF4P02776 101 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 EDN2P20800 178 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 RPL35P42766 123 aaKnown RBP9.57□□□□□ -0.88
VMP1-202ENST00000585847 CEBPGP53567 150 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 UBE2G1P62253 170 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 TMEM183BQ1AE95 376 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
VMP1-202ENST00000585847 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 M0R036 132 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 MT-ND4LP03901 98 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 ID1P41134 155 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 BTF3L4Q96K17 158 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
VMP1-202ENST00000585847 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 C2orf70A6NJV1 201 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 TUBA4BQ9H853 241 aa9.55□□□□□ -0.88
VMP1-202ENST00000585847 OVOL1O14753 267 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 TSPAN4O14817 238 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 CBLN1P23435 193 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 SNRPD3P62318 126 aaKnown RBP9.54□□□□□ -0.88
VMP1-202ENST00000585847 GUCA2BQ16661 112 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 ZNF674Q2M3X9 581 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 SAPCD1Q5SSQ6 148 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 LINC01551Q86U37 167 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 C16orf92Q96LL3 132 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 NDFIP1Q9BT67 221 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 SMCO4Q9NRQ5 59 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 PPP1R14DQ9NXH3 145 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 LENEPQ9Y5L5 61 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 SMAD5-AS1Q9Y6J3 95 aa9.54□□□□□ -0.88
VMP1-202ENST00000585847 PRKDCP78527 4128 aaKnown RBP9.53□□□□□ -0.88
VMP1-202ENST00000585847 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 CSN3P07498 182 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 FOLR2P14207 255 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 IGLL1P15814 213 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 TM4SF20Q53R12 229 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 CENPWQ5EE01 88 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 TCF24Q7RTU0 167 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 DNAH3Q8TD57 4116 aa9.53□□□□□ -0.88
VMP1-202ENST00000585847 IGHV3OR16-8A0A075B7F1 116 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 SLC17A3O00476 420 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 SOCS3O14543 225 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 ZNF207O43670 478 aaKnown RBP9.52□□□□□ -0.89
VMP1-202ENST00000585847 LTAP01374 205 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 CD33P20138 364 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
VMP1-202ENST00000585847 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
VMP1-202ENST00000585847 ADIRFQ15847 76 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 PSG3Q16557 428 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 FAM231DQ6ZW35 169 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 C15orf54Q8N8G6 183 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 IGF2BP2-AS1Q96M15 143 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 IMMP2LQ96T52 175 aa9.52□□□□□ -0.89
VMP1-202ENST00000585847 SPAG8Q99932 426 aaPredicted RBP9.52□□□□□ -0.89
VMP1-202ENST00000585847 C7orf77A4D0Y5 90 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 OR4C46A6NHA9 309 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 APOHP02749 345 aaPredicted RBP9.51□□□□□ -0.89
VMP1-202ENST00000585847 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
VMP1-202ENST00000585847 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
VMP1-202ENST00000585847 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 GOLT1AQ6ZVE7 132 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 Q86TA4 180 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 BAGE2Q86Y30 109 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 EXOC3-AS1Q8N2X6 119 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 DYNLRB2Q8TF09 96 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
VMP1-202ENST00000585847 TRBV20OR9-2A0A075B6H5 130 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 H7BYZ3 331 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 GCGP01275 180 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 CT45A10P0DMU9 189 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 INSL3P51460 131 aa9.5□□□□□ -0.89
VMP1-202ENST00000585847 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
VMP1-202ENST00000585847 CT83Q5H943 113 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms